Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7796g00001 ATGGAGAAGGGAAGATTTTATTACCATTCTGGCAATATGGATCTTGTAAGCAGAAGATACCTGATTTATGCATCACAACATGTATCACAACCACAAGCTCTTTCTCCAATCACAAGTCCAGGGATTTCAATCTTTCATCCTCATCAGCATTCTTCTAGCACCAGCTTTCCCATCATTGCAATTGCAATAATAGGAATAATGGCCACGGCTTTCTTGCTGGTGAGCTACTACATCTTTGTGATCAAATGCTGCCTCAATTGGCACCGAATTGATGTTCTAAGACGTTTCTCTCCATCTAGAAGGCGTCAAGATCCATCGCCAATATACTCACCAGGCACAGGAACTCGTGGACTAGATGAGGCACTGATCCGGTTAATCCCAGTGATTCAATACAAAGCACAAGGGAATGGAGAATTAGGAGAAAGAAGCTTCGGTGAATGTGCTGTTTGCTTGAATGAGTTTCAACAAGATGAGAAGCTCAGGATTATACCAAATTGCAGCCATGTGTTTCACATTGATTGCATAGATGTTTGGCTTCAGAGCAATGCCAATTGCCCTCTTTGTAGAACAAGCATTTCCCTGACAAGCAGATTCCATATTGATCAGCTTCTCACTCTAAGGCCTTCTTCCCCTCAGGATCAAAACCCACCTAGGGAAAACCTTATTGGGGGTGATGAAGATTTTGTTGTGATTGAATTGGGTAATGATCATGATAGAAGCCAAAATTTGCAAGAAAGAGGCAATACTTTGGAGTTACCATTACCAACATGTTTTATTAGTCCTTCTTCACCAAGGAAGTTGGAACATAGAAGTGTGCAGAATAAGAAAGCAATGAAACTGCATAAAGTGACAAGCATGGGGGATGAGTGTATTGATATTAGAGCCAAAGATGACCAGTTCTCCGTCCAACCAATTAGGAGGTCTTTCTCCATGGACTCATCAGGGGATAGACAGTTCTATTTAGCAGTTCAAGAAGCTCTGAGGCTGCACAACAGGCAAGTCAGTGAGGTCAGCTCCATTGAAGGCTGCAGTGGTAGTGGCAGTAGAGCCAAGAGATCATTCTTTTCCTTTGGACATGGAAGTAGATCCAGGAGTTCTGTGCAACCTAGTCCTCCCAAGTCGTGCACTCTTTCAATGCCATGTGCACGTAAGCATGGGCAGGGACTACAAGATCTTTTGCACACTTCAGGAACCCGTGAGATGCTACATCTTTGTCAAAAAGAAATTTCACTTTGGAGTGTACAAGAACATTCTACCAAAAACAAGAACAATAATTCCTAG 1281 0.4254 MEKGRFYYHSGNMDLVSRRYLIYASQHVSQPQALSPITSPGISIFHPHQHSSSTSFPIIAIAIIGIMATAFLLVSYYIFVIKCCLNWHRIDVLRRFSPSRRRQDPSPIYSPGTGTRGLDEALIRLIPVIQYKAQGNGELGERSFGECAVCLNEFQQDEKLRIIPNCSHVFHIDCIDVWLQSNANCPLCRTSISLTSRFHIDQLLTLRPSSPQDQNPPRENLIGGDEDFVVIELGNDHDRSQNLQERGNTLELPLPTCFISPSSPRKLEHRSVQNKKAMKLHKVTSMGDECIDIRAKDDQFSVQPIRRSFSMDSSGDRQFYLAVQEALRLHNRQVSEVSSIEGCSGSGSRAKRSFFSFGHGSRSRSSVQPSPPKSCTLSMPCARKHGQGLQDLLHTSGTREMLHLCQKEISLWSVQEHSTKNKNNNS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7796g00001 426 MobiDBLite consensus disorder prediction 358 375 - -
Mupr7796g00001 426 MobiDBLite consensus disorder prediction 355 375 - -
Mupr7796g00001 426 SUPERFAMILY RING/U-box 146 195 - -
Mupr7796g00001 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 194 IPR013083 -
Mupr7796g00001 426 PANTHER RING-H2 FINGER PROTEIN ATL16 39 370 IPR044600 GO:0016567|GO:0016740
Mupr7796g00001 426 Pfam Ring finger domain 146 189 IPR001841 -
Mupr7796g00001 426 ProSiteProfiles Zinc finger RING-type profile. 147 189 IPR001841 -
Mupr7796g00001 426 FunFam E3 ubiquitin-protein ligase ATL6 109 195 - -
Mupr7796g00001 426 SMART ring_2 147 188 IPR001841 -
Mupr7796g00001 426 CDD RING-H2_EL5-like 146 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7796g00001 Mupr-Chr7796 3883 8229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7796g00001 47 358 C3H Transcription Factor Family AT1G04360 54.227 5.12e-104 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7796g00001 - - gmx:100775286 613.224