Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7758g00007 ATGAGAGGTAAGGATTCTATGTTTACAATCAATGGCCATTTAGGATATTCCACATGTGAGAAGTCTCCTCAAAGAAGTTCATCTTTGAATTGGCCAAAGCAAACTAGAGCACAGGAAGTAGCTTGCAGTTTCATCTCATACAATCATTTTTTCACAGTTTTCATAAAGCCTGTTCATCTGGCAGAGAACCAGATGCCTATGCCAGATTTGAAAGGCATTCTTGAGAACAAGGAGAAGTATGTGATGCTGCAGACAGGGGAAAGATCATGGAATGTAAAGTTGATCCCCACTCACAATTTTACACATTGCAGGTTCTCTGCTGGCTGGTCCTTGTTTGCCAGGGAAATTGAATTGCAACCAGGAGATGGAGGATTCAGTTTTCAAAGAGTGATAACATCTCTACTTCAAACTGCTTTCATGGCTGGGAATGCTATCTTCCCTATTCGTTTCTTCAAGATTATTCTTAAAACTAATCTTGAAAGAATTCAAATACCCAACAAATTTGCAAGGAAATATGGAGGTGGCTTGCCAAATCCTGTGTTTATCAAGCCTCCCGATGGCACTGAATGGAAAGTGTATTGGACACATCAGAATGGTGAGATTTGGTTCGAAAAAGGTTGGAAACAATTTGTTGAACATTTTTCTCTCCATCATGGACATGTGATTTTCTTTACATATGGAGGGACTTCCCAAATTGATGTTCTAATACTTGACCAAAGTGCACTAGAAATAAACTATCCTTCGTGTAACCCTTGTGACGAAGAAGAATCAGTTATAATTTTGGATGAATGGTCTGACCAGAAGGCTAAACAAATGATAGTGAGTGTTGATCTCTTTCATTTGCATCCCATAGATAAGAAGTGTACTGAAAGAACTCGTTCCTTGAATCAACCGAAGCAGAGTAGTGCACAGGAGGTAGCAAGAAATTTCATATCATACAATCCTTTTTTCACAGTTATCATAAGATCTTCTAGCCTTAGAAAAGGCCGTCAGAATGTACCTAGTTTAAAAGGTTTTATTGAGAACAAGGAGAAGAATGTGACACTGCTGCTTGGGGAAAGATCATGGAAAGTAAAGTTGCTCCCTGTTTACAAGGCTTTTTCATTCCGCTGCCTCTCTGCTGGTTGGAGCTTGTTTACAAGGGAAAGTGAATTGCAAGCAGAAGATGTTTGTGTCTTTGAACTGGTTAACATAAAAGATTTAGTTTTTCAAATGCATGTTTTCAAAAATCAGGTAAGTGGAACAGAACAAAATAGAGAAAGACAAACTATCTATGAAAAAAAGACAAGAGTGTTGTTATTCATTCAAATATTTGAAAGTAGACCGACCAGAAATGCAATCTGTGACTGTAAAATCCCAAAGATATAA 1368 0.3794 MRGKDSMFTINGHLGYSTCEKSPQRSSSLNWPKQTRAQEVACSFISYNHFFTVFIKPVHLAENQMPMPDLKGILENKEKYVMLQTGERSWNVKLIPTHNFTHCRFSAGWSLFAREIELQPGDGGFSFQRVITSLLQTAFMAGNAIFPIRFFKIILKTNLERIQIPNKFARKYGGGLPNPVFIKPPDGTEWKVYWTHQNGEIWFEKGWKQFVEHFSLHHGHVIFFTYGGTSQIDVLILDQSALEINYPSCNPCDEEESVIILDEWSDQKAKQMIVSVDLFHLHPIDKKCTERTRSLNQPKQSSAQEVARNFISYNPFFTVIIRSSSLRKGRQNVPSLKGFIENKEKNVTLLLGERSWKVKLLPVYKAFSFRCLSAGWSLFTRESELQAEDVCVFELVNIKDLVFQMHVFKNQVSGTEQNRERQTIYEKKTRVLLFIQIFESRPTRNAICDCKIPKI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7758g00007 455 ProSiteProfiles B3 DNA-binding domain profile. 316 411 IPR003340 GO:0003677
Mupr7758g00007 455 SMART B3_2 316 411 IPR003340 GO:0003677
Mupr7758g00007 455 SMART B3_2 150 240 IPR003340 GO:0003677
Mupr7758g00007 455 SMART B3_2 50 131 IPR003340 GO:0003677
Mupr7758g00007 455 Gene3D - 295 411 IPR015300 -
Mupr7758g00007 455 Gene3D - 32 133 IPR015300 -
Mupr7758g00007 455 SUPERFAMILY DNA-binding pseudobarrel domain 51 122 IPR015300 -
Mupr7758g00007 455 SUPERFAMILY DNA-binding pseudobarrel domain 149 247 IPR015300 -
Mupr7758g00007 455 CDD B3_DNA 149 238 IPR003340 GO:0003677
Mupr7758g00007 455 PANTHER B3 DOMAIN-CONTAINING 148 399 - -
Mupr7758g00007 455 ProSiteProfiles B3 DNA-binding domain profile. 147 240 IPR003340 GO:0003677
Mupr7758g00007 455 SUPERFAMILY DNA-binding pseudobarrel domain 314 409 IPR015300 -
Mupr7758g00007 455 Pfam B3 DNA binding domain 158 231 IPR003340 GO:0003677
Mupr7758g00007 455 Pfam B3 DNA binding domain 316 410 IPR003340 GO:0003677
Mupr7758g00007 455 Gene3D - 147 241 IPR015300 -
Mupr7758g00007 455 CDD B3_DNA 316 409 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7758g00007 Mupr-Chr7758 54973 60050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7758g00007 149 263 B3 DNA Binding Superfamily AT1G49475 38.462 9.98e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr7758g00007 B3 1.5e-07 CL0405