Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7758g00001 ATGTATCTTCCACAGAAGTTTTGGGGTAGGGAGGGTGAAGAAAACAAAAATGTAAAAACCAAATTCTTCAAGGAGTCCATGAAGAAAAAGTATATTGCTAAAAATCTTGAGGAAGTCGGGAAAAGGCTTTTTCAGATGATAAATGATCTGCCAACAATCTTCGAACTTGTGACAGGAAGTGCTAAACAATCAAAGGATCAACCAGCTGCTCACTACAATGGTAACAAATGCAAATCAAGTGGAAAGGTGTCTCGTCAGTCTGAGTCTCAGGCCAAGGGAATGAAGATGTCTGCACCACCCAAAGAAGAGGACGAGAGTGGAGAAGAAGAAGAAGATGATGAACAAGGTGCAACATGTGGTGCTTGTGGTGATAATTATGGCAATGATGAATTCTGGATCTGTTGTGATATGTGTGAAAGATGGTTCCATGGTAAATGTGTTAAAATTACTCCTGCCAAGGCTGAACACATCAAGCAATACAAGTGCCCTAGCTGCAGTAACAAGAGGTCCTCAAAGGGACTTGATGCTGCCCGAGCCAATGCTCTCGTGCAAGGTGAGGGTCTTGTTGGCAGGTTCTTTGTGAAATCTTTAAGGGATCTGAAGCGTCAATTCCATTTCGATTTGAACTTTGAAGCAGTTACATGA 645 0.4202 MYLPQKFWGREGEENKNVKTKFFKESMKKKYIAKNLEEVGKRLFQMINDLPTIFELVTGSAKQSKDQPAAHYNGNKCKSSGKVSRQSESQAKGMKMSAPPKEEDESGEEEEDDEQGATCGACGDNYGNDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRSSKGLDAARANALVQGEGLVGRFFVKSLRDLKRQFHFDLNFEAVT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7758g00001 214 CDD PHD_AL_plant 119 168 IPR044104 -
Mupr7758g00001 214 PANTHER CPG BINDING PROTEIN 40 170 IPR045104 GO:0006355|GO:0042393
Mupr7758g00001 214 MobiDBLite consensus disorder prediction 64 93 - -
Mupr7758g00001 214 Pfam PHD-finger 119 168 IPR019787 -
Mupr7758g00001 214 MobiDBLite consensus disorder prediction 103 117 - -
Mupr7758g00001 214 SMART PHD_3 118 166 IPR001965 -
Mupr7758g00001 214 MobiDBLite consensus disorder prediction 64 117 - -
Mupr7758g00001 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 173 IPR013083 -
Mupr7758g00001 214 FunFam PHD finger alfin-like protein 111 167 - -
Mupr7758g00001 214 ProSitePatterns Zinc finger PHD-type signature. 119 165 IPR019786 -
Mupr7758g00001 214 ProSiteProfiles Zinc finger PHD-type profile. 116 168 IPR019787 -
Mupr7758g00001 214 SUPERFAMILY FYVE/PHD zinc finger 108 170 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7758g00001 Mupr-Chr7758 5696 7234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7758g00001 41 173 Alfin-like Transcription Factor Family AT1G14510 74.436 7.79e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Mupr7758g00001 PHD 8.8e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7758g00001 K26274 - gmx:100170698 246.514