LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr7738g00001	AAGGGTGAAGAAGTGAAGGCAGTAATATTAGCAGAGGAAGGTAGACAAGACACCCCATTTTGGAAAATGCCTGAAGGGAGCAAAAGGAGGATACATTTCAGCAAATTGTATAGTTTTTCTTGTTTGAAATCTCCATTCAGAGATGGTCATTCCCAAATTGGGCAGAAGGGGTACTCACGGGTTGTCCACTGCAATGATCAGGATAACCCTGAAGCAGTTCAGTTGAGTTATGGAGGCAATTATGTTTCAACAACCAAGTATACAGCTTTTAATTTTATCCCCAAGTCTCTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTATTGTTGTTGCCTGTGTTTCATTTAGTCCATTGGCACCTTTTACACCTCTAAGTATTGTTGCTCCGTTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAGCAGGATATAGAGGCAAACAATCGAAAGGTTCAGGTATATGGTAGGAATTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATGTCATTAAAGTGTATAAGGATGATTACTTTCCTGCCGATCTTCTTCTGCTTTCATCAAGCTATGGTGATGGGGTTTGTTATGTTGAGACTATGAATCTTGATGGAGAAACTAATCTAAAATTAAAGCATGCCTTGGAGGTGACATTTCATATTCATGATGAAAAAGCTCTCCAAAAGTTTAGGGCTGTGGTTAAATGTGAGGATCCTAAGGAAGATCTGTACTCATTTATTGGAGCTTTACAATATGATGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGCGTTGTTATCTTTACTGGCCATGATACAAAAGTCATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTCAGTACCTTGATTTTGATATCCTTTATTGGTTCTGTCTTTTTTGGTGTTGAGACCAAAAGGGATATTAGTTCTGGCAGGTATAGAAGATGGTATCTTCGTCCAGACAATACAACGGTGTTTTATGATCCTAGAAGGGCAACACTTGCTGCTCTTCTTCATTTTTTGACTGCCCTTATGTTGTATGGATATCTAATTCCAATATCACTTTATGTGTCCATAGAAATTGTGAAAGTTCTTCAGAGCATTTTCATCAACCAAGACCAGGAAATGTATTATGAAGAGATAGATAGGCCAGCTCGTGCGCGCACTTCTAATTTGAACGAGGAACTTGGTCAGGTTGATACAGTATTGTCTGACAAAACTGGCACTTTGACATGTAACTCCATGGAGTTTGTCAAATGTTCAATAGGGGGCATTCGATATGGTCGTGGTATGACGGAAGTTGAGAAGGCACTTGCTAGGAGAGGAAAAGATGGGGAATATGAAGTTGATGGTGGATCATCTGATTTCTTGGGCCAGAATAATGAGGCAGTGGAATTTCGGCATCCAATTAAGGGCTTTAACTTTAGAGATGAGCGCATAATGAATGGGCAATGGGTTAATGAACGGTATCCAGACTTCATACAGAGATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGTGGATAAACAGTCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTCGCAAGGACACAAACAAGCATATCATTGCATGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCCTGGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTCAGGAATGAGGAGAATCAATTATTGCTCCTAAGCAAGGGTGCAGACAGTGTAATGTTTGAAAGGCTCTCGCAACATGGAAGACATTTTGCATTTATTAGAGTGTACATTTTACACCTTGACACCTGGTACCGATTTTCACACAAGGTTCCTGAATGTATTGAAAAGCTTGCCCGGGCAAAAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATACATTAACAAGGCTTGTTCTAGATTTTGTTTCTAAGGAA	2160	0.4	KGEEVKAVILAEEGRQDTPFWKMPEGSKRRIHFSKLYSFSCLKSPFRDGHSQIGQKGYSRVVHCNDQDNPEAVQLSYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFIVVACVSFSPLAPFTPLSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDVIKVYKDDYFPADLLLLSSSYGDGVCYVETMNLDGETNLKLKHALEVTFHIHDEKALQKFRAVVKCEDPKEDLYSFIGALQYDGKEYPLSLQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLILISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAALLHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEEIDRPARARTSNLNEELGQVDTVLSDKTGTLTCNSMEFVKCSIGGIRYGRGMTEVEKALARRGKDGEYEVDGGSSDFLGQNNEAVEFRHPIKGFNFRDERIMNGQWVNERYPDFIQRFFRVLAICHTAIPDVDKQSGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQLLLLSKGADSVMFERLSQHGRHFAFIRVYILHLDTWYRFSHKVPECIEKLARAKIKLWVLTGDKMETAVNIGYTLTRLVLDFVSKE	720

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr7738g00001	720	Pfam	Phospholipid-translocating ATPase N-terminal	62	127	IPR032631	-
	Mupr7738g00001	720	FunFam	Phospholipid-transporting ATPase	138	308	-	-
	Mupr7738g00001	720	SUPERFAMILY	Calcium ATPase, transduction domain A	165	306	IPR008250	-
	Mupr7738g00001	720	Gene3D	-	671	714	IPR023214	-
	Mupr7738g00001	720	Gene3D	-	498	661	IPR023299	GO:0000166
	Mupr7738g00001	720	NCBIfam	phospholipid-translocating P-type ATPase	77	656	IPR006539	GO:0000287\|GO:0005524\|GO:0015914\|GO:0016020\|GO:0140326
	Mupr7738g00001	720	SUPERFAMILY	Calcium ATPase, transmembrane domain M	68	542	IPR023298	-
	Mupr7738g00001	720	PANTHER	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	61	655	-	-
	Mupr7738g00001	720	ProSitePatterns	E1-E2 ATPases phosphorylation site.	448	454	IPR018303	-
	Mupr7738g00001	720	Coils	Coil	138	158	-	-
	Mupr7738g00001	720	Pfam	E1-E2 ATPase	158	351	-	-
	Mupr7738g00001	720	SUPERFAMILY	Metal cation-transporting ATPase, ATP-binding domain N	453	651	IPR023299	GO:0000166
	Mupr7738g00001	720	Pfam	Cation transport ATPase (P-type)	564	652	-	-
	Mupr7738g00001	720	SUPERFAMILY	HAD-like	434	709	IPR036412	-
	Mupr7738g00001	720	Gene3D	-	133	309	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr7738g00001	Mupr-Chr7738	17392	22640	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr7738g00001	31	715	Primary Pumps ATPases	AT1G68710	58.981	0.0	886

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr7738g00001	K01530		-	gmx:100779714	1168.3