Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7703g00006 ATTGCATCTTCAATACGGGTACAGTGGACCAATATGAGCTCTCGGACAGGCAAGGGGCCTGCTGTCAGAAGTTACAGGCGGAGAAAGGCAGTTTTAGACCTTGACCTTAACAGTGTACCATGTGTTGAGAATCGGGAGCAGGAGGGACCTTCAACACAGCCAGGCCCTCAAGAAGTTCAAGTTGCCCAGCAGCCACAGGTTACCCAACCTCCGATGATTGATGTGGAAGCCATTGACGATGATGTTGTTGAATGTACTCCAAGGGCTTTTGCTGAGGCTAAAAACAATTCCAGAAGAAATCGTGGGAGGACTGTAGTTGATCTTGATCTAGAAGATCAGACTGCGGTAACCAACAATAATAACAACAAACGCAGAAGAGAACCAGCTAGACAAACGATTATTAATTGTGATAAGTATATAAATTTGGAAGGCTGTAGCAGTTCTACGAGGGAAAGTGTTAAAAAGCCACGTGAACCTCCAAAGGAGCCTGTCTTCAACTGTCCAATATGCATGGGCCCTTTGGTAGAAGAGATGTCAACAAGATGTGGTCATATTTTTTGCAAGGATTGCATCAAGGCTGCTATAAGTGCGCAGGGTAAATGCCCCACCTGTAGAAAAAAGATTACTGTGAAAGAGCTTATAAGGTTTGGACACATGCAAAGAAGGCCTCTAGAAGCACTGCTTAGGAGAGTAAATCACATGATTTTAGCCTTGGATCTTATGAATAATACCGCTGAGAATTTAGTTTTTAATCAAGTCCAACTGATGGTGTTTGGTGACCCA 783 0.4381 IASSIRVQWTNMSSRTGKGPAVRSYRRRKAVLDLDLNSVPCVENREQEGPSTQPGPQEVQVAQQPQVTQPPMIDVEAIDDDVVECTPRAFAEAKNNSRRNRGRTVVDLDLEDQTAVTNNNNNKRRREPARQTIINCDKYINLEGCSSSTRESVKKPREPPKEPVFNCPICMGPLVEEMSTRCGHIFCKDCIKAAISAQGKCPTCRKKITVKELIRFGHMQRRPLEALLRRVNHMILALDLMNNTAENLVFNQVQLMVFGDP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7703g00006 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 248 IPR013083 -
Mupr7703g00006 261 PANTHER ELFLESS, ISOFORM B 12 215 - -
Mupr7703g00006 261 Pfam Zinc finger, C3HC4 type (RING finger) 166 204 - -
Mupr7703g00006 261 ProSiteProfiles Zinc finger RING-type profile. 167 205 IPR001841 -
Mupr7703g00006 261 MobiDBLite consensus disorder prediction 1 22 - -
Mupr7703g00006 261 MobiDBLite consensus disorder prediction 44 70 - -
Mupr7703g00006 261 MobiDBLite consensus disorder prediction 1 18 - -
Mupr7703g00006 261 ProSitePatterns Zinc finger RING-type signature. 182 191 IPR017907 -
Mupr7703g00006 261 SMART ring_2 167 204 IPR001841 -
Mupr7703g00006 261 MobiDBLite consensus disorder prediction 40 70 - -
Mupr7703g00006 261 SUPERFAMILY RING/U-box 162 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7703g00006 Mupr-Chr7703 15193 17681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7703g00006 23 215 C3H Transcription Factor Family AT5G48655 52.308 6.79e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7703g00006 K22651 - gmx:100792853 297.745