LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr7703g00001	ATGGTGAGTAAAGAAGAGTTCCGTTCATGTCTGCACATGCTTTACCTGCATTCTCTTCCTTTCTCTTACATTGCTCCCAAACGAGGTGGAAAAGCTCCGGTACTAGCCTCTAAGAAGAAGCCTGAGAAGGTTACTAATCCGCTATTCGAGAAGCGTCCGAAGCAGTTCGGAATCGGAGGGGCGTTGCCTCCGAAGAGAGACCTTACTCGGTTCGTGAAGTGGCCTAAGACCGTTCAGATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGTTGAAGGTTCCCCCAGCTTTGAACCAGTTCACAAAGACTCTTGACAAAAACCTAGCAACAAGCCTGTTCAAGATACTTTTGAAGTACAGGCCCGAGGATAAAGCAGAAAAGAAAGAGAGGCTTTTGAAAAGGGCTCAGGCAGAGGCTGATGGAAAAACTGTTGAGGCTAAGAAGCCTATTGTTGTGAAGTATGGTCTCAACCATGTTACCTACCTTATTGAGCAGAACAAAGCACAGCTTGTTGTGATCGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGCAGGAAGATGGAAATTCCGTACTGCATTGTTAAGGGAAAGGCACGCTTGGGAACGGTTGTCCATAAGAAAACTGCATCTGTTTTGTGCTTGACAACTGTTAAGAATGAAGATAAATTAGAGTTCAGCAGGGTCTTGGAGGCTATCAAGGCTAACTTCAATGACAAATATGACGAGTACAGAAAGAAGTGGGGTGGTGGAATCATGGGATCCAAATCCCAAGCCAAAACCCGGGCAAAGGAAAGGCTCCTTGCCAAGGAAGCTGCTCAGAGGATGTCTTAG	849	0.4617	MVSKEEFRSCLHMLYLHSLPFSYIAPKRGGKAPVLASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAEADGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTVVHKKTASVLCLTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMS	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr7703g00001	282	Coils	Coil	125	145	-	-
	Mupr7703g00001	282	PANTHER	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	66	258	-	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A/RS6 family signature	152	166	IPR018492	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A/RS6 family signature	171	184	IPR018492	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A/RS6 family signature	187	197	IPR018492	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A/RS6 family signature	197	211	IPR018492	-
	Mupr7703g00001	282	Gene3D	-	74	257	IPR029064	-
	Mupr7703g00001	282	SUPERFAMILY	L30e-like	112	253	IPR029064	-
	Mupr7703g00001	282	ProSitePatterns	Ribosomal protein L7Ae signature.	190	207	IPR004037	GO:0042254\|GO:1990904
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	70	87	IPR001921	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	209	233	IPR001921	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	114	127	IPR001921	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	53	70	IPR001921	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	148	168	IPR001921	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	90	109	IPR001921	-
	Mupr7703g00001	282	PRINTS	Ribosomal protein L7A family signature	241	261	IPR001921	-
	Mupr7703g00001	282	FunFam	60S ribosomal protein L7a	74	257	-	-
	Mupr7703g00001	282	Pfam	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	141	229	IPR004038	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr7703g00001	Mupr-Chr7703	2151	3939	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr7703g00001	24	282	Cytoplasmic Ribosomal Protein Gene Family	AT3G62870	85.714	3.11e-168	464

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr7703g00001	K02936		-	gmx:100792324	497.278