Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7701g00003 ATGGCTCCTACTGAGCCTCCTGCAATCAATATTGAAGCCGAAAATTGCCCTGAAGCGGTGCTTAATTGGTACAACCTCACTTCACTTCCAGATTACAGGCGCAAATGTGGCTTGAGCAGAGACCTCGCGTTGAAAGCGAAGCAACATCTTTGTTTCTTGGGTTGGAGACTTTGGTATATTAGCAAACAAGGAAGGTGGGAATTGCGTTACACCTCACCCATTAACGGAAAGAACTACATTTCTCTTAGAAGGGCATGCTATGGTTGCATACAAGAAGGAGGGTGCAATAATGGAATCCCTCAAAATGTTCCACTTGTTCAAGAAAACAATGCTTCATCTTCTCCACCAAAGAAAACGGCAAGGAAACCGAGAAAGTACCAAAAGAAAACTAAGATGCAGCCAAAGAGACGCAAGAAAAGCAAGAAGGATGTCGAAGATATTGATGTTAACGATGATGAGTCATATGAATATGAGGAGTTTGAAGAAGCGTCTAGTTCTAGAAATGCTAGAATGAGGGATGATTGTCAAAAAGAAGATTCACAGCAAGAAGAAAAAGGTACATATCAAAACGATAGCATTTGTTCCGTTTGTCGTTATGGTGGTGAACTGCTGTTGTGTGATCGATGTCCCTCTTCGTTCCACATCGATTGTTTAGGTTTAGGTCATGTTCCTGATGGTGATTGGTTCTGTCCATCGTGTTGTTGCAAAATATGCAATCGATCTAGGTACACAGAAAATTGTGATGATAACGTGGATGTTAATAGTCTTCTAGTTTGTAATCAGTGTGAGAGAAAATGCCACATTGGGTGCTTAAAAGCTCCAGACTTTACCCACACAGGTGATGGAGATCATCTTGATAATGAAAATTGGTTCTGCAGTACTGATTGTGAGGAGATATTTTTGGGTCTGCAAAATCTGCTGGGAAATCCGATTTATGTTGGTGCAGATAATCTAACTTGGACACTGTTGAAGGGTGTGAAAAGTGATAGCTTTGAAGAATCTGATCCTACTTGGGACGAAGAGGATTGGAGTCAAAAAGAAAGCAAGCTGAATGTGGCTCTTGGTGTATTGCGTGGTTGTTTTAATCCAGTTATTGATGCTTTCTATGGGAGAGATATGATTGAAGATGCTGTTTTCAGTAGAGAGTCAAAACTGAATCGTTTGAACTTTCATGGGTTCTATACTGTGGTTTTGGAGAAGAATGAGGAGGTGGTTTCTGTTGCCACTATAAGGGTTTTTGGCAAGGCGCTTGCGGAAATACCTTTTGTGGGTACTAGCATGCAGTTCAGAAGACGTGGAATGTGTCGCTTTTTGATGAATGAGATTGAGAAACAGTTGAGTTACTTGGGAGTGGAGGAGATAATCTTGCCTTCTTCGCATGGCGTGGTAGACACTTGGACAAACTCATTTGGCTTTGTAAGGATGACAGCTTCAGATAAGTTGAAGTTTCTTGATTATGTTTATCTCAACTTTGAGGTAAAACCTAAAACAGTTTGGAAAGTCTATGAGTTTACTATGATCATTTAA 1527 0.406 MAPTEPPAINIEAENCPEAVLNWYNLTSLPDYRRKCGLSRDLALKAKQHLCFLGWRLWYISKQGRWELRYTSPINGKNYISLRRACYGCIQEGGCNNGIPQNVPLVQENNASSSPPKKTARKPRKYQKKTKMQPKRRKKSKKDVEDIDVNDDESYEYEEFEEASSSRNARMRDDCQKEDSQQEEKGTYQNDSICSVCRYGGELLLCDRCPSSFHIDCLGLGHVPDGDWFCPSCCCKICNRSRYTENCDDNVDVNSLLVCNQCERKCHIGCLKAPDFTHTGDGDHLDNENWFCSTDCEEIFLGLQNLLGNPIYVGADNLTWTLLKGVKSDSFEESDPTWDEEDWSQKESKLNVALGVLRGCFNPVIDAFYGRDMIEDAVFSRESKLNRLNFHGFYTVVLEKNEEVVSVATIRVFGKALAEIPFVGTSMQFRRRGMCRFLMNEIEKQLSYLGVEEIILPSSHGVVDTWTNSFGFVRMTASDKLKFLDYVYLNFEVKPKTVWKVYEFTMII 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7701g00003 508 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 234 IPR013083 -
Mupr7701g00003 508 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 299 IPR013083 -
Mupr7701g00003 508 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 355 494 IPR000182 GO:0016747
Mupr7701g00003 508 ProSiteProfiles Zinc finger PHD-type profile. 191 236 IPR019787 -
Mupr7701g00003 508 CDD NAT_SF 396 456 - -
Mupr7701g00003 508 SUPERFAMILY FYVE/PHD zinc finger 184 240 IPR011011 -
Mupr7701g00003 508 PANTHER PHD FINGER PROTEIN 12 18 492 IPR042163 GO:0003714|GO:0045892
Mupr7701g00003 508 Pfam PHD-finger 193 235 IPR019787 -
Mupr7701g00003 508 MobiDBLite consensus disorder prediction 106 184 - -
Mupr7701g00003 508 MobiDBLite consensus disorder prediction 118 138 - -
Mupr7701g00003 508 Gene3D - 342 489 - -
Mupr7701g00003 508 SMART PHD_3 235 296 IPR001965 -
Mupr7701g00003 508 SMART PHD_3 193 234 IPR001965 -
Mupr7701g00003 508 MobiDBLite consensus disorder prediction 160 184 - -
Mupr7701g00003 508 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 381 476 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7701g00003 Mupr-Chr7701 6397 8686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7701g00003 170 449 PHD Transcription Factor Family AT5G58610 46.643 1.72e-76 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr7701g00003 PHD 9.6e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7701g00003 - - pvu:PHAVU_002G248300g 447.588