Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7664g00002 ATGGCGTTGGCAGGGTTGCAAGAGCACCTTAAGTTAGCCAGAGACTACGCTCTGGAAGGTCTCTACGACACCTCCATCATCTTCTTCGACGGTGCCCTTGCACAGATCAACAAGCACCTGAGCAGTGTGGATGACCATTTAATTAGGGCAAAATGGATGAACGTTAAGAAGGCTCTGTCCGAAGAAACGGAAGTTGTGAAACAGTTAGATGCAGAGAGAAGGGCTTTTAAAGATAACCCGGTTGGAAGACGCCCTGCCTCGCCACCCATTTCAGCCAAGTCTTCGTTTGTTTTTCAGCCGTTGGATGAGTATCCGACTTCATCCAGTGCTCCTATTGACGATCCTGATGTGTGGAGACCGCCCAGTAGGGATACCACTAGTAGGAGGCCCGCCAGGCCTGGTCAAGTGGGTTCTCGTAAATCTTCCCAGGATGGGGCTTGGGCTCGCGGTTCTGCACCTAGAACTTCTGCAACTGGGCGTGGCGCCAAAGCTGGTGCTACCAGTAGGGTTAACTCGGCCACCCGACCATCCACTACTGGCAAGAAACCTGCTGCTTCTGGAAGGTCTACCAAGACCGATACGGTTGTTACTAATGGTGATGCTGAAGATGGTAAGTCAAAGAAGGGACAATATGAAGGTCCTGATGCCGAATTGGCTGCAATGCTTGAACGGGATGTGTTAGAAACCTCTCCCGGAGTGAGATGGGATGATGTTGCAGGGCTTACTGAAGCAAAAAGGCTTCTAGAAGAAGCTGTTGTGCTGCCCTTGTGGATGCCTGAGTATTTCCAGGGAATCAGGAGACCGTGGAAAGGTGTCCTCATGTTTGGACCTCCAGGAACTGGAAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACCACTTTCTTTAATGTATCTTCTGCTACTTTGGCTTCTAAGTGGCGTGGAGAGAGTGAGCGTATGGTGCGGTGTTTGTTTGATCTCGCAAGAGCATATGCACCAAGCACAATATTCATTGATGAAATTGATTCTCTATGCAATGCTAGGGGGGCATCTGGGGAGCATGAATCGTCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAGTAATAGTGCCACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCTGCGACTAACTTCCCATGGGATATTGACGAGGCACTAAGGAGAAGGCTGGAAAAACGTATATATATTCCTCTTCCAAATTTTGAGAGCCGTAAAGAGCTAATCCGGATAAATTTGAAGACTGTTGAGGCAAGTTGTGATGTGGCTCCTGACGTCAATATAGATGAAGTAGCTCGCCGAACAGAGGGCTATAGTGGAGATGATTTGACAAATGTCTGTCGCGATGCTTCCTTGAACGGTATGAGGCGTAAGATAGCAGGAAAGACTCGTGATGAAATCAAGAACATGTCCAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGGGAAAGGTCCAACGAAGTGTTTCTCAGGCTGACATTGAACGCCATGAGAAGTGGTTTACCGAGTTTGGATCCGCATAA 1575 0.4781 MALAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSSVDDHLIRAKWMNVKKALSEETEVVKQLDAERRAFKDNPVGRRPASPPISAKSSFVFQPLDEYPTSSSAPIDDPDVWRPPSRDTTSRRPARPGQVGSRKSSQDGAWARGSAPRTSATGRGAKAGATSRVNSATRPSTTGKKPAASGRSTKTDTVVTNGDAEDGKSKKGQYEGPDAELAAMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEASCDVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALGKVQRSVSQADIERHEKWFTEFGSA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7664g00002 524 Pfam ATPase family associated with various cellular activities (AAA) 272 409 IPR003959 GO:0005524|GO:0016887
Mupr7664g00002 524 Gene3D - 230 515 IPR027417 -
Mupr7664g00002 524 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 4 524 IPR028596 GO:0008017|GO:0008568|GO:0051013
Mupr7664g00002 524 Pfam AAA+ lid domain 435 476 IPR041569 -
Mupr7664g00002 524 ProSitePatterns AAA-protein family signature. 381 400 IPR003960 GO:0005524|GO:0016887
Mupr7664g00002 524 MobiDBLite consensus disorder prediction 161 197 - -
Mupr7664g00002 524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 510 IPR027417 -
Mupr7664g00002 524 CDD Kp60-NTD 4 72 - -
Mupr7664g00002 524 FunFam Katanin p60 ATPase-containing subunit A1 410 500 - -
Mupr7664g00002 524 FunFam Katanin p60 ATPase-containing subunit A1 1 77 - -
Mupr7664g00002 524 SMART AAA_5 268 411 IPR003593 GO:0016887
Mupr7664g00002 524 Gene3D - 410 500 - -
Mupr7664g00002 524 Pfam Vps4 C terminal oligomerisation domain 477 522 IPR015415 -
Mupr7664g00002 524 MobiDBLite consensus disorder prediction 128 149 - -
Mupr7664g00002 524 Coils Coil 59 79 - -
Mupr7664g00002 524 MobiDBLite consensus disorder prediction 198 213 - -
Mupr7664g00002 524 PANTHER AAA DOMAIN-CONTAINING 22 523 - -
Mupr7664g00002 524 Gene3D - 1 77 - -
Mupr7664g00002 524 MobiDBLite consensus disorder prediction 76 213 - -
Mupr7664g00002 524 FunFam Katanin p60 ATPase-containing subunit A1 230 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7664g00002 Mupr-Chr7664 12102 15371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7664g00002 224 516 Calmodulin-binding Proteins AT3G56690 39.735 1.56e-49 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7664g00002 K07767 - gmx:100787634 950.273