LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr7654g00002	ATGGCCGACGTCGTTTCCAAGACCCCTCCGAGCACCCTCATCAGCCCCAGCAAGAAGGAGTCCGCCAACCTGTTACTCGGGCGCTTTGAGATTGGCAAGCTCCTTGGCCATGGAACCTTCGCCAAGGTGTACTACGCTCGCAACCTCAAAACCGGTGAAGGCGTCGCCATCAAGGTTATCGACAAAGAAAAGATCCTGAAAGGCGGTCTCGTGGCCCACATCAAGCGCGAGATCTCCATCCTCCGCCGCGTGCGCCACCCCAACATCGTGCAACTCTTCGAAGTCATGGCCACCAAGAGCAAGATCTATTTCGTAATGGAATTCGTTCGCGGGGGTGAGCTTTTCAACAAGGTGGCCAAGGGGAGGCTCAAGGAGGAGGTTGCCAGAAAGTACTTTCAACAATTGATCTCCGCGGTTGGGTTCTGCCACGCCAGAGGGGTGTACCATAGGGATCTCAAACCCGAGAATCTCTTGCTCGACGAGAACGGCAACCTTAAAGTCTCCGATTTCGGGTTGAGCGCGGTTTCGGATCAAATCAGACAGGACGGGTTGTTTCACACGTTTTGCGGGACGCCTGCGTATGTTGCTCCCGAGGTTTTGGCGAGGAAAGGGTACGATGGTGCCAAGGTTGATCTCTGGTCTTGCGGTGTGGTGTTGTTTGTGTTGATGGCGGGGTATTTACCTTTCCACGACCAGAATGTTATGGCAATGTACAAGAAGATTTACCGAGGGGAGTTTCGATGTCCGAGGTGGTTTTCTCCTGACCTGTCGAGGCTGCTGACTCGGCTTCTGGATACGAAGCCAGAGACCCGGATTGCCATTCCGGAGATTATGGAGAACAAGTGGTTCAAGAAAGGGTTCAAACAGATCAAGTTTTATGTGGAGGATGACAGACTTTGCAATGTGGATGATGAGATGCTTTTGGACAACGAGGACGACACGGCCTCTGTTGCTTCCTTTTCTGATTGCTCCGTTTCTGAGTCTGACTCCGAGGTTGAGACTAGGAGGAGGAATGCTTCCTTGCCTAGACCTCCTAGTTTGAATGCTTTTGACATTATATCCTTCTCCCCCGGTTTTGACCTCTCTGGCTTGTTCGAGGAGAAAGGGGACGAGACCAGGTTCGTGACTGCTGCGCCTGTTTCAAGGATTATTTCCAAGCTGGAGGAGATTGCTCAGTTGGTTAGGTTTACCGTCAGGAAGAAGGATTGCAGGGTTAGTTTAGAGGGTACCCGAGAGGGCGTCAAGGGGCCTTTGACTATTGCTGCTGAGATTTTCGAGTTAACACCTTCTTTGGTTGTCGTCGAGGTCAAGAAAAAGGGAGGGGACAGAGCTGAGTATGAGAGGTTTTGTAACAATGAATTGAAGCCCGGCCTTCAGAACTTGCTCGTCGACGACTCTGCAACTTCTTCCACCGTCTCTACACCTACTGCGCCTTCCCTACTACGTGGCCATTCTGAACCTTCTCCTGACATTTCTTCGGATATTTAA	1488	0.5155	MADVVSKTPPSTLISPSKKESANLLLGRFEIGKLLGHGTFAKVYYARNLKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEFVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTRLLDTKPETRIAIPEIMENKWFKKGFKQIKFYVEDDRLCNVDDEMLLDNEDDTASVASFSDCSVSESDSEVETRRRNASLPRPPSLNAFDIISFSPGFDLSGLFEEKGDETRFVTAAPVSRIISKLEEIAQLVRFTVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNNELKPGLQNLLVDDSATSSTVSTPTAPSLLRGHSEPSPDISSDI	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr7654g00002	495	FunFam	Non-specific serine/threonine protein kinase	344	462	-	-
	Mupr7654g00002	495	MobiDBLite	consensus disorder prediction	467	495	-	-
	Mupr7654g00002	495	Gene3D	Transferase(Phosphotransferase) domain 1	19	340	-	-
	Mupr7654g00002	495	ProSiteProfiles	Protein kinase domain profile.	29	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr7654g00002	495	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	22	456	-	-
	Mupr7654g00002	495	Gene3D	Kinase associated domain 1, KA1	342	463	-	-
	Mupr7654g00002	495	SMART	serkin_6	29	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr7654g00002	495	ProSitePatterns	Protein kinases ATP-binding region signature.	35	58	IPR017441	GO:0005524
	Mupr7654g00002	495	ProSiteProfiles	NAF domain profile.	342	366	IPR018451	GO:0007165
	Mupr7654g00002	495	FunFam	Non-specific serine/threonine protein kinase	19	336	-	-
	Mupr7654g00002	495	CDD	CIPK_C	348	459	-	-
	Mupr7654g00002	495	FunFam	Non-specific serine/threonine protein kinase	20	108	-	-
	Mupr7654g00002	495	Pfam	Protein kinase domain	29	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr7654g00002	495	SUPERFAMILY	Protein kinase-like (PK-like)	25	284	IPR011009	-
	Mupr7654g00002	495	Pfam	NAF domain	344	400	IPR004041	GO:0007165
	Mupr7654g00002	495	MobiDBLite	consensus disorder prediction	467	481	-	-
	Mupr7654g00002	495	CDD	STKc_SnRK3	28	282	-	-
	Mupr7654g00002	495	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr7654g00002	Mupr-Chr7654	15483	16970	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr7654g00002	24	492	CBL-interacting serine-threonine protein kinases	AT4G18700	79.830	0.0	764

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Mupr7654g00002		Pkinase	2.6e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr7654g00002	-		-	gmx:100790133	881.708