Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7633g00002 ATGTTTAAGGGTGATACCATGTTTGTCAAAGGGTTAGCTGGGGTAACAAAAGCTGAAGAGATTGGTTTCATGATGGAGGAAAATCTACCTCCCGGATTCAGGTTCCATCCTACAGATGAAGAGCTCATCACATGTTATCTTACAAGGAAGGTTTCTGATTCTGGCTTCACATCCAAAGCTATAGCAGTTGTTGATCTCAACAAGTCTGAACCTTGGGACCTCCCAGGTAAGGCCTCTATGGGGGAGAAAGAGTGGTACTTCTTCAACTTAAGAGATCGAAAGTATCCAACGGGACTTCGAACAAACCGAGCCACTGAATCAGGCTATTGGAAAACCACAGGAAAAGACAAGGAAATTTTTCGTGCTGGGGTTTTGGTTGGAATGAAGAAAACCCTAGTCTTTTATAAGGGTAGAGCTCCAAGGGGCCAGAAAAGCAATTGGGTCATGCACGAATATAGACTAGAAAACAAGCACCATATTAGACCTTCCAAGGATGAATGGGTGGTTTGCAGGGTTTTCCAAAAGAGCTTAGCAGTGAAAAAACCCCAGCAAACACCCTCCTCGCAACCAGAGTCCCCATGTGAGATAGCCTCAATGGTGAATGAATTTGGTGATGTTGAGCTTCCTAATCTAAATAACATTGCAAATTCATCAGGTGGACTCAGTAACAACATTTCAGGACAAGCTTTCAACATTGCTGATCTCAGTAACAATGTTAACACAAATATGAACTTGACCATGAATTGGCCATCTGCAAGCGAGGTTCGTCCCTCATGGCCTTCTGGTTTGCTAAATCCAAGTATTTCTATAAATTCTTTGCTTCTCAAGGCATTGCAAATTAGGAGTTATCAACAAAGAGAAGCAGCAGCAGCAGCAGATAATTTTGCATCATATATGACTCAAGGAGTATCCCTCGTTGGAACTGACCTAAGTTCAAATCTCACTGCCTCTTCTTCTGAAGTTTTAGAATGTATAACTACACAGCAGCAACAGCAGGAGCAACCATTCAATTTGGACTCCATGTGGTGA 1029 0.4247 MFKGDTMFVKGLAGVTKAEEIGFMMEENLPPGFRFHPTDEELITCYLTRKVSDSGFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYKGRAPRGQKSNWVMHEYRLENKHHIRPSKDEWVVCRVFQKSLAVKKPQQTPSSQPESPCEIASMVNEFGDVELPNLNNIANSSGGLSNNISGQAFNIADLSNNVNTNMNLTMNWPSASEVRPSWPSGLLNPSISINSLLLKALQIRSYQQREAAAAADNFASYMTQGVSLVGTDLSSNLTASSSEVLECITTQQQQQEQPFNLDSMW 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7633g00002 342 ProSiteProfiles NAC domain profile. 29 175 IPR003441 GO:0003677|GO:0006355
Mupr7633g00002 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 257 - -
Mupr7633g00002 342 Pfam No apical meristem (NAM) protein 30 154 IPR003441 GO:0003677|GO:0006355
Mupr7633g00002 342 SUPERFAMILY NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Mupr7633g00002 342 Gene3D NAC domain 38 178 IPR036093 GO:0003677|GO:0006355
Mupr7633g00002 342 FunFam NAC domain-containing protein 100-like 38 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7633g00002 Mupr-Chr7633 20518 23279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7633g00002 25 342 NAC Transcription Factor Family AT3G18400 59.633 3.84e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr7633g00002 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7633g00002 - - gmx:100787111 513.072