Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr762g00005 ATGGACAAAGCAAACACGTGGGCCACACAGCAATTAGTCGTGTCTTGTTCACCACGCCACACTCTTCTTCTTCTTCTTCATATTCTCTCACCCACTTCACTCCATTCTTCACACACACTTGAGACAATGTCTAAAGATGATACCTCTTCACAGGATTCTTCATCTCACCTTGAATTGGGTCTCTCCTTAACCCTTTCTTCCTATGCCACCGCTTCCTCCTTCAGTAGGACTGGGACCAATACATCTCCATCTATTTCTCATTCTCATTCTCATTCTTCTCTTCCCCCTACCGCTCCAAGTCAAGTTGTTGGATGGCCTCCCCTTGGAGCATATAGAATGAACAACTATAATAGCCATGCAAAATCACCAGCCACAGAAGTATTCAATTCTACAGTTGACAAAAGTGCAAGCAATAGTACTGGGGTTAGGAAGAGTGCAGATGGTGGCAGTGATAATAACAACATTATTTCCAAAGATAAAGGAAACCTTAGAAGTTCCCTGTTTGTGAAAGTAAAAATGGATGGGATACCAATTGGAAGGAAGGTTGATTTGGGTGCTCATGGTTCCTATGAAACCTTAGCTCAAACCTTGGAGGATATGTTTGATGAATCAACTACAGTCCTCACTCACAAAGGATCAAATGGAGAAGATCATGGTACGGTAGTTGGAGCAGATGGGCATTTGAATTTGCTGGATGGTTCTACCGACTTTGTGCTCACTTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGTGGATGTTCCTTAACTCTGTGAGGAGGCTAAGAATCATGAGGACGCCTGAAGCTAGTGGACTTGCTCCAAGATTGGAAGAAAAGAACAGCAGATTGAAATGCAAGCCCGAAACAGAGGAAATGAAAACAGAAGTAACCAAGCCCTAA 915 0.4317 MDKANTWATQQLVVSCSPRHTLLLLLHILSPTSLHSSHTLETMSKDDTSSQDSSSHLELGLSLTLSSYATASSFSRTGTNTSPSISHSHSHSSLPPTAPSQVVGWPPLGAYRMNNYNSHAKSPATEVFNSTVDKSASNSTGVRKSADGGSDNNNIISKDKGNLRSSLFVKVKMDGIPIGRKVDLGAHGSYETLAQTLEDMFDESTTVLTHKGSNGEDHGTVVGADGHLNLLDGSTDFVLTYEDKEGDWMLVGDVPWWMFLNSVRRLRIMRTPEASGLAPRLEEKNSRLKCKPETEEMKTEVTKP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr762g00005 304 SUPERFAMILY CAD & PB1 domains 162 269 - -
Mupr762g00005 304 MobiDBLite consensus disorder prediction 76 99 - -
Mupr762g00005 304 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Mupr762g00005 304 Pfam AUX/IAA family 58 280 IPR033389 -
Mupr762g00005 304 ProSiteProfiles PB1 domain profile. 166 273 IPR000270 GO:0005515
Mupr762g00005 304 MobiDBLite consensus disorder prediction 280 304 - -
Mupr762g00005 304 MobiDBLite consensus disorder prediction 127 157 - -
Mupr762g00005 304 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 56 275 IPR003311 GO:0005634|GO:0006355
Mupr762g00005 304 MobiDBLite consensus disorder prediction 76 101 - -
Mupr762g00005 304 MobiDBLite consensus disorder prediction 279 304 - -
Mupr762g00005 304 Gene3D - 161 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr762g00005 Mupr-Chr762 39281 43789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr762g00005 170 296 B3 DNA Binding Superfamily AT1G59750 32.812 8.81e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr762g00005 AUX_IAA 3.9e-59 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr762g00005 K14484 - gmx:100813788 364.385