Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7612g00005 ATGGGTTGCACCGTGAAGAATAAAACCATTCGAGCGAATCGGAAAGCTCGTTTGGTGAAACCTCGTTCTAATTCATCCTCTAATTTGAACAAGGAATGGATGGTGCCCTATAGATACCATGATGACACCGCTCCCAATTCCGATTCAAACCCTAATATTGATTCATCCAGTTGGGTTTTCTGCACTGAGGATCAATTAGAAGACGTTTTGCTGAAAAACATTGAAATTATATACAACGATACTGTGTTAAAGCTTGTTGCTTCAGGGCACAATGAAGATGTTGTCGTCAAAGCGATTCTGCATAATGGGCATTGTTATGGTGCCATGGATTTGGCAACAAACGTTAAGGATAATACCTTGGCTTGTTTGAATAAGGGAAATTTGGACAAGTATGAGTTTCAGCCTTCGTTCTCTGACTTGAAGAAGCTTCAAGAGTACACTCTCGCATGCCTTGTGTCTTTGTTGCAAGAGTTGAGGCCCGATTTAAGTAGAGGTGATGCTATGTGGTGTCTCCTCATGAGCAATTTCCATGTGCTAAAGGCAAGCGCCATCCAAATTCCTGTTGGAAACCAGTGTCCTCCTACTTTAACTGAAATCGAGAATGAGGAATCGGGATTTGGAAACGAGGGAGGCTCGGGTTTTCCTTTGAACGAGTTATTTTGTGGTACGGAGATGAATATACAGTTGCAGAGAGATATTGAATTTCCTAAAAGACTTGATCTTACTCCTGCCATGAAGTCCTTGTTGAAAAGAAATGTTGCTATGTTTGCTGCCGGTTATAGGGCTAACTCAAAACAGTTGAATTCCCAAAAAGATTTGATCTTTCCTGGCAATAGCACCGTTTCAAAATTGGATTCTTCATCTGTTTCTGGGACTGCAGTCCTAGGGGAGCAGCCTGGTGACTCTCACAATCTGAATGACCAAGATGAGCTGAACTCTGTGCTTAGTAAATTTCTTGATCTAAATATTGACAAGAATTTGGAGTTGGTGGGAGAAGATGAGAAGGATGAGGTGCTAGTCATTCTAGTTCAACAGATAAAGGATCTTGAGAAACAGGTCAAGGAGCGAAAAGATTGGGCTCATGAGAAGGCAATCCAAGCAGCAAGAAAGCTAAGCAGTGATCTGATTGAACTAAAAATGTTCAAGATGGAAAGAGAGGAGAATCAAAAACTGAAGAATGAGAAAGTGGAGCTTGGGGAGCCAACCATGATGAGGCTCTCAGAAATGGAGAATGCCTTGAGGAAGGTTAGTGGTCAAGTAGACCAAGCAAATGCCGCTGTCAAAAAATTTGAGGCGGAGAAAGCTGAAATCAAAGCAGAGTTAGAGGCTTCTAAGTTAAGTGCATCAGAGTCCATCACAAACTGCTTGCAAGTTGCAAAAAGGGAGAAAAAGTGCTTAAAGAAGCTTCTGGCTTGGGAAAAACAGAAGGCTAAATTACAACAAGATATTTCAGATGAAAAACAGAATATATTGGAGATACGAGAAGAATTGGCTCAGATTAGACAGTGTACAAAAGAAGCTGAGGTCATGTGGGGGGAAGAGTTGAAAGCGAAGGAGGAAGCCGAAGCACTAGTTGAAGAGGAACGCAGTTCTAAGGAAGCAGCCGAGGCTAATAGAAATAGAAACGTCAAGGCCTTACGGCTGAAGATAGACATAGATTTCCAGCGTCGTAAGGATGATCTCCTAAGGCTTCAGCACGAGGTTTCGTGTCTTAGAGCATCTGCTGCTTTGCCTACAAGTGAGTCTGAGGATGCAGAGCCGCAGAGAGACACAATTTCTAAGATTCTGCAAGAATTAGATAACGTGAAGGATTTTTCAGGAAAAGAAATCAACGGTAATAGAGAGTGCATTATATGTGGAAAAGATGAAGTATCCGTAATATTCTTACCATGTGCACACCAAGTTATGTGTGCTAGTTGCAGTAAAGAGTATGGGAGAAAGGGCAATGCTGTTTGTCCATGCTGCCGGGTTCCCATCGAACAGAGAATCCGTATATTTGGGGCAACTTCGTAG 2013 0.4223 MGCTVKNKTIRANRKARLVKPRSNSSSNLNKEWMVPYRYHDDTAPNSDSNPNIDSSSWVFCTEDQLEDVLLKNIEIIYNDTVLKLVASGHNEDVVVKAILHNGHCYGAMDLATNVKDNTLACLNKGNLDKYEFQPSFSDLKKLQEYTLACLVSLLQELRPDLSRGDAMWCLLMSNFHVLKASAIQIPVGNQCPPTLTEIENEESGFGNEGGSGFPLNELFCGTEMNIQLQRDIEFPKRLDLTPAMKSLLKRNVAMFAAGYRANSKQLNSQKDLIFPGNSTVSKLDSSSVSGTAVLGEQPGDSHNLNDQDELNSVLSKFLDLNIDKNLELVGEDEKDEVLVILVQQIKDLEKQVKERKDWAHEKAIQAARKLSSDLIELKMFKMEREENQKLKNEKVELGEPTMMRLSEMENALRKVSGQVDQANAAVKKFEAEKAEIKAELEASKLSASESITNCLQVAKREKKCLKKLLAWEKQKAKLQQDISDEKQNILEIREELAQIRQCTKEAEVMWGEELKAKEEAEALVEEERSSKEAAEANRNRNVKALRLKIDIDFQRRKDDLLRLQHEVSCLRASAALPTSESEDAEPQRDTISKILQELDNVKDFSGKEINGNRECIICGKDEVSVIFLPCAHQVMCASCSKEYGRKGNAVCPCCRVPIEQRIRIFGATS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7612g00005 670 Pfam Family of unknown function (DUF6592) 73 183 IPR046527 -
Mupr7612g00005 670 SUPERFAMILY RING/U-box 615 662 - -
Mupr7612g00005 670 ProSiteProfiles Zinc finger RING-type profile. 616 656 IPR001841 -
Mupr7612g00005 670 Coils Coil 406 447 - -
Mupr7612g00005 670 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 667 IPR013083 -
Mupr7612g00005 670 Coils Coil 518 538 - -
Mupr7612g00005 670 Coils Coil 469 496 - -
Mupr7612g00005 670 CDD RING-HC_MIP1-like 614 665 - -
Mupr7612g00005 670 Pfam Zinc finger, C3HC4 type (RING finger) 613 661 - -
Mupr7612g00005 670 PANTHER OS05G0141500 PROTEIN 1 665 IPR046934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7612g00005 Mupr-Chr7612 32147 35191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7612g00005 596 666 C3H Transcription Factor Family AT1G73950 34.667 1.93e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7612g00005 - - gmx:100789166 916.376