Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7612g00004 ATGCCAGTTCCACTTGCCCCCTACCCTCCACCAGCTCCATATACGCCTCCACCAAATGGTGCGCAGAGTCAACTTGTGTGTTCAGGGTGTAGAAACCTTTTGCTCTATCCAGTTGGAGCCACCTCTGTGTGCTGTGCTGTTTGCAATGCAGTCACAACAGTGCCACCTCCTGGCACAGAAATGGCCCAGTTAGTTTGTGGAGGCTGTCACACTTTCCTCATGTACATCCGTGGAGCCACAAGTGTGCAATGCTCTTGTTGTCACACGGTCAATCTAGCTTTGGAAGCAAATCAGGTGGCACATGTCAACTGTGGGAACTGTAAGATGCTACTCATGTACCAATATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAGTTTCGTAACATCAGTTGGGCATAGAACTTAA 408 0.4902 MPVPLAPYPPPAPYTPPPNGAQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTTVPPPGTEMAQLVCGGCHTFLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCKMLLMYQYGARSVKCAVCSFVTSVGHRT 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7612g00004 135 Pfam LSD1 zinc finger 66 90 IPR005735 -
Mupr7612g00004 135 Pfam LSD1 zinc finger 27 51 IPR005735 -
Mupr7612g00004 135 Pfam LSD1 zinc finger 104 128 IPR005735 -
Mupr7612g00004 135 NCBIfam zinc finger domain, LSD1 subclass 63 92 IPR005735 -
Mupr7612g00004 135 NCBIfam zinc finger domain, LSD1 subclass 101 130 IPR005735 -
Mupr7612g00004 135 NCBIfam zinc finger domain, LSD1 subclass 24 54 IPR005735 -
Mupr7612g00004 135 PANTHER PROTEIN LSD1 14 54 IPR040319 -
Mupr7612g00004 135 SUPERFAMILY Multiheme cytochromes 27 125 IPR036280 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7612g00004 Mupr-Chr7612 17119 21566 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mupr7612g00004 zf-LSD1 7.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7612g00004 - - gmx:100788563 246.899