LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr7605g00001	ATGAATTTCTTAACACCATCAAACAGTGGGAGCAAAATACAGCTAGTGAGATTACTAGAGACACTCACAATTTCTCTTCTGGTGCTCACAGCAGAATCACTAAAGTTCAACATAACAAACTTCGACGACCCGGAGAGTGCAAGAAGCATGGCCTACATGGGCGACGGCAGAACAAACAACGGTACCATAGAACTCAACTCAGTGAACTATCTTTTCCGCGTTGGGAGAGCCTTGTACGCAAAACCCATGCGCCTGTGGGACCCATCTTCGGGTGTGGTAACCGACTTCTCCACGCGCTTCACTTTCACCATCAACAAAGCCTTCGATGACACCTACGACGAAACCTACGCCGACGGTTTTGCCTTCTACATAGCCGGTCACGGCTACGATATTCCACCGAACGGAGCAGGTGGAACTTTCGGCCTTTTCAATGGCACCTCCAATAGCTTCCTTCCCCAAAACCGCGTGCTTGCGGTTGAGTTTGACACATTTAACGGCACAATTGACCCTCCCATGAAACACGTTGGCATAGACAATAACACTCTTAAATCATGGCCTTATGCCGAGTTTGACATCGACAATAACCTCGGAAACAAATGTAACGCTTTGGTAACCTACACTGCTTCCAACAAGACCCTCTCCGTATCTTGGTCCTTCAACGGAATCGCAACGCCTTCCAATTCTTCACTTTCTCTCCCGATTGACCTCATAGGAATTCTACCCGAGTGGGTGGATGTTGGCTTCTCCGCTTCAACCGGCGACTACCGTGAACGAAATGTTATTCATTCTTGGGAGTTCAGTTCCACGTTGAATTCCACTGATTCGAATAATAATAATTCCTCGAATAATAATGTACCCGAGCACGGGAACGGAAAAGGCAACGTTTTGCTGGTTGTTGTGGTTACTTGTTCAACGGTGCTGGTGGTCGTGGCCGCGAGTGTTGCAGCATGCGTAATTGCCATGAAGAAGAGAAGGGTTGATGATGATGAAGACGGTTTGCGTGGACCCACATCGGTTAAGTTTGATTTGGATAGAGTCGCTATACCTAGAAGATTTGATTACAAGGAACTCGTTGCAGCCACAAACGGGTTCGCGGATGATACAAGGCTTGGACGAGGAGGCTGGGGACAGGTTTACAAAGGGGTTCTCAGTGGCTTAGGAAGGGTTGTTGCTGTCAAAAGGATTTTCGCTAACATTGAAAATTCAGAGAGAGTTTTCATCAACGAGGTTAGGATCATAAGCCGTCTTATACATAGAAACTTGGTGCAGTTCATAGGGTGGTGCCACGAGCAAGGAGAGTTTTTGTTGGTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAATCTTTGGCCTGGGATGTTAGGTACAAGGTAGCGTTAGGTGTGGCTTTGGCACTTCGTTATCTTCACGAGGATGCGGAGCAGAGTGTTCTTCATAGGGATATTAAGTCGGCTAATGTTTTGTTGGACACGGATTTTAGCACCAAGCTTGGTGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAGGACTCAGAAGACAGGGGTGGTGGGGACTTATGGGTACCTTGCCCCAGAATATATCAACGGAGGTAGGGCTAGCAAGGAATCAGACATTTATAGTTTTGGGGTTGTGGCTTTAGAACTTGCATGTGGAAGGAGGACTTACCAAGATGGGGAGTTTCATGTGCCTCTGGTGAACTGGATGTGGCGATTGTACGTGGAAGGGAATGTTCTGGATGCTGTTGATGAGAGACTGAATAAGGAGTTTGATGTGGATCAAATGACAAGCTTGATTGTTGTGGGGCTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCTAAGGCTGCACAAGTAATAAAAGTTCTTCAACTTGAAGCGCCATTGCCAGTGCTTCCACTTGATATGCATGACCATTCTCCTCCTTCTCTAGCTACTCATGCCAAACCCAACGATAATTCCTTACAATCATTACCCTTCAGTAACAGTGTTATAAGTGTTGGACGTTAA	2034	0.4661	MNFLTPSNSGSKIQLVRLLETLTISLLVLTAESLKFNITNFDDPESARSMAYMGDGRTNNGTIELNSVNYLFRVGRALYAKPMRLWDPSSGVVTDFSTRFTFTINKAFDDTYDETYADGFAFYIAGHGYDIPPNGAGGTFGLFNGTSNSFLPQNRVLAVEFDTFNGTIDPPMKHVGIDNNTLKSWPYAEFDIDNNLGNKCNALVTYTASNKTLSVSWSFNGIATPSNSSLSLPIDLIGILPEWVDVGFSASTGDYRERNVIHSWEFSSTLNSTDSNNNNSSNNNVPEHGNGKGNVLLVVVVTCSTVLVVVAASVAACVIAMKKRRVDDDEDGLRGPTSVKFDLDRVAIPRRFDYKELVAATNGFADDTRLGRGGWGQVYKGVLSGLGRVVAVKRIFANIENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEYMPNGSLDTHLFGDKKSLAWDVRYKVALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLRTQKTGVVGTYGYLAPEYINGGRASKESDIYSFGVVALELACGRRTYQDGEFHVPLVNWMWRLYVEGNVLDAVDERLNKEFDVDQMTSLIVVGLWCTNPNDKERPKAAQVIKVLQLEAPLPVLPLDMHDHSPPSLATHAKPNDNSLQSLPFSNSVISVGR	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr7605g00001	677	FunFam	L-type lectin-domain containing receptor kinase IX.1	349	440	-	-
	Mupr7605g00001	677	SUPERFAMILY	Concanavalin A-like lectins/glucanases	32	270	IPR013320	-
	Mupr7605g00001	677	CDD	lectin_legume_LecRK_Arcelin_ConA	34	270	IPR001220	GO:0030246
	Mupr7605g00001	677	ProSitePatterns	Legume lectins alpha-chain signature.	240	249	IPR000985	-
	Mupr7605g00001	677	Pfam	Protein kinase domain	366	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr7605g00001	677	ProSiteProfiles	Protein kinase domain profile.	364	640	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr7605g00001	677	SMART	serkin_6	364	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr7605g00001	677	ProSitePatterns	Legume lectins beta-chain signature.	157	163	IPR019825	-
	Mupr7605g00001	677	CDD	STKc_IRAK	370	632	-	-
	Mupr7605g00001	677	Pfam	Legume lectin domain	33	279	IPR001220	GO:0030246
	Mupr7605g00001	677	ProSitePatterns	Protein kinases ATP-binding region signature.	370	393	IPR017441	GO:0005524
	Mupr7605g00001	677	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	484	496	IPR008271	GO:0004672\|GO:0006468
	Mupr7605g00001	677	FunFam	L-type lectin-domain containing receptor kinase IX.1	441	641	-	-
	Mupr7605g00001	677	SUPERFAMILY	Protein kinase-like (PK-like)	348	650	IPR011009	-
	Mupr7605g00001	677	PANTHER	-	60	635	-	-
	Mupr7605g00001	677	Gene3D	-	31	285	-	-
	Mupr7605g00001	677	Gene3D	Phosphorylase Kinase; domain 1	349	440	-	-
	Mupr7605g00001	677	Gene3D	Transferase(Phosphotransferase) domain 1	441	636	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr7605g00001	Mupr-Chr7605	4144	6719	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr7605g00001	33	644	Receptor kinase-like Gene Family	AT5G10530	45.265	1.11e-176	516

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mupr7605g00001		Pkinase	3.4e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr7605g00001	-		-	gmx:100305427	972.23