Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7602g00002 ATGGAGGGAGATCAAATTGCCTCCAATTACTCTTTTCCACCTGGCTTCAGATTCCACCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAGCTCACGTCCACTTCCAGCTTCCATTATGGCTGAAGTTGATCTGTATAAGTATAACCCGTGGGAGCTACCCAATAAGTCTTTGTTTGGGGAGGAAGAGTGGTATTTCTTTAGCCCCAGAGACAGGAAGTACCCAAATGGACTGAGGCCAAACAGGGCAGCAGCCTCAGGATACTGGAAGGCAACTGGAACTGACAAGCCAATTCTTTCTTCTTGTGGATCAAAGCGTATAGGAGTCAAGAAAGCTCTTGTGTTTTATTCAGGTCGACCTCCTAAGGGAACTAAGACGGATTGGATCATGAATGAATATAGATTGCTTGACACAACCACCAAATCCTCCAGGCTAAAGGGTTCCATGCGGTTGGATGACTGGGTACTATGCCGCGTTCGACATAAAGGCTACTCTTCGAAGATTTCATGTGAGAATCTAGAGAATCCTAGTGAACTAAACTTGCCAGGAAAACTACCGAGGACTGAAGAATACCCAACAAACATGAATTATCGGGCTGACATGATCACTGATTATCAATATAAAGACTATCAAATCATAGCCTCTATTCTTGTTGGTGGACCTATACCTCCCACTGAAAACATGCCAAATGTGAACTTTAAGGGATGCAAAGGCAACAATCTAGTTTCAGTTTATGAAGATGGTTTCACTAAAGTGACTTCTCAAACGACAATTCCTTCTTTGGACAGTTACTTCAACCCACTGACAAGAAAATCCAATGAAGATGAACAGTATGGAAATCTCATTTCTTTTAACAGGAAGTTCAACACTGAGAACAAAATGGACGAATCTCCTAGCAAGGTGTTGACCGGTAGAGAACTGAACTGCTACAACCAAAACCAGTCTCAAGATGATATTTTCAATGGGAACCCCCCAGATCCTAGCATCAATTTTCAAGAGCTAAGCGAATTAGCCTTTACACTAAGAGATGTCGTCTTTACAGCCAATGAATACCAATCATACAATTACAGCAGAAAAAAGACCATGCTTCCAGACTCCAGGTACCACACGAAACAAAGAACACAAAAACGTGTACGTAGGCTGGATTCCAAGAAGAACACAGATCAGAACGATGTCGATGCAGATATTTCGACTAGACCTTATCTGGAAAGGAAACAAAAATTGCAATTCAATAGAAACTTGCAAATTTCCACAGAAAGAAGAGTGCAATTAAACACGTTGATTACCTCGGAACTTGCCGATCCAGTTCCTGAACATAGATGGGGGAAATATGAGAAAATGATTATCCTCTTAAAAACCAACATCTTTCAACAGAATTCCCAAACAGAAGATGCACAACAGAACAAACCTCATTCATATCTTGGGCCAGATTCTTCA 1449 0.4113 MEGDQIASNYSFPPGFRFHPSDEELIVHYLQNKISSRPLPASIMAEVDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSCGSKRIGVKKALVFYSGRPPKGTKTDWIMNEYRLLDTTTKSSRLKGSMRLDDWVLCRVRHKGYSSKISCENLENPSELNLPGKLPRTEEYPTNMNYRADMITDYQYKDYQIIASILVGGPIPPTENMPNVNFKGCKGNNLVSVYEDGFTKVTSQTTIPSLDSYFNPLTRKSNEDEQYGNLISFNRKFNTENKMDESPSKVLTGRELNCYNQNQSQDDIFNGNPPDPSINFQELSELAFTLRDVVFTANEYQSYNYSRKKTMLPDSRYHTKQRTQKRVRRLDSKKNTDQNDVDADISTRPYLERKQKLQFNRNLQISTERRVQLNTLITSELADPVPEHRWGKYEKMIILLKTNIFQQNSQTEDAQQNKPHSYLGPDSS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7602g00002 483 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Mupr7602g00002 483 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 329 - -
Mupr7602g00002 483 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Mupr7602g00002 483 MobiDBLite consensus disorder prediction 385 402 - -
Mupr7602g00002 483 MobiDBLite consensus disorder prediction 372 402 - -
Mupr7602g00002 483 FunFam NAC domain-containing protein 72-like 21 171 - -
Mupr7602g00002 483 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Mupr7602g00002 483 MobiDBLite consensus disorder prediction 464 483 - -
Mupr7602g00002 483 SUPERFAMILY NAC domain 7 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7602g00002 Mupr-Chr7602 6280 10395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7602g00002 5 172 NAC Transcription Factor Family AT1G69490 66.667 7.98e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr7602g00002 NAM 7.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7602g00002 - - gmx:100817193 647.506