Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7589g00003 ATGACTAGGGCTGTCCGCAGTAGGGTACTTAAAGATGCCAATGGTGATATTAGCGATCATCTGCGCAACCACATCCATTTGACAAATTGTATTCACCTGAAGAACCATATGCACAAGAACAGTCCCATACTGGCTGATAGATCAATCATGAGGGACCTAGTTGTGCTGCAAAGATCACGGTCTCTAAGGGACCCTTCTGCAAGTCCTCCATCATGGCACTCGCCGTCTGTAGTTGACTTGCTTTTCAAAAGAGTTGAAAATGATGCAGTGTCGCAAGGGGGAAGAAGGTCTGTAGGTGTTGAGCGAAGGAAGGAAGGGAGGAGATTGTCTGGAACCTCACCACCCTTGGTGAGTATAGGTTCATCAAGAGTTGCTCCGGGTGAGGTTGGTAGGGGCAATGATGGGATAACAGTACCTAGTGAACGAAGTAGCAGGAGTGGAATAGGAGAGGGCAGGAGAGTTGGGAGAGAAGAATCTGGTAGGAAGAATGATAGGCCTGACTTTTTGGATGTTAGTCAAGAGGAGCCTCTCAATCAAGCTGGCAAAAGTTTGGCTGAAGATGTTACTTCAAGGCACTCTGAGTCTAAAGAGAGAAAGAGCAAACAGAGGGGGAAGAATGTTAGAGATGTTCAAGTTAAGACCCTTTCTGAGCAGCTGAATGATGTTCCATTGGATAGTGATGATTTAGCATCATCAAACATTCATTTCCGTGGAAGGTTTCCTAGACAGGAGAAAATTATTGAGGAGGTAGAAGCCCGGATGCGCAGTCATAGCAGTGGAATGAATAGGGGGAAACGACGTAAGTTTCGAAGCACGCGGAGAACTCGGGTTGCTACAACATCAAGAGATATTGGAGCTGAGTGTGAACTGTCTGTGGCTTCCAACTCATTAGCTCAGGCTTCAGCTCACCAGAAATATCACTTGGAGGAGGCTGATGAGTTCGCAGATGAAAAATTTACTAGGGCTCCAAAAAATGGGTGTGGCATTCCTTGGAATTGGTCCAGAATTCATCATAGAGGTAAAACATTCCTTGACATGGCTGGAAGAAGTTTGTCTTGTGGTTTATCTGACTCAAGGTTGAAGAAAGGGACATTTGCTGCCAATGGAAGAAATATTTCTGAGATGCCTGTGGCATCTGAGCGCTCAAGCTCATGTACAAAGTCTGATGCAGAGGCACTGCCTTTACTAGTTGAGGCATCTGGATCTCATGCAAGCACTGAAAATGCTTGTTGGGATCGTGACTATTCTGGGGAACTAGGTCTTTTTGGTGATAATTTATTCAAGCATGATATTGATTCTGACCTCGCTTCTGAAGCTAGATCTGGTGATCAGCATAAGTTGCGAGGGAATCGTCACAGTAGACACCAAAGTTTAACACAAAAGTATATGCCTCGAACCTTCAGAGATATGGTTGGGCAGAATTTAGTGGCACAAGCTCTTTCAAACGCAGTAATGAGAAGGAAAGTTGGATTGTTGTATGTGTTTTATGGTCCCCATGGCACTGGAAAAACTTCCTGTGCTCGCATATTTGCTAGAGCTCTGAATTGTAGTTCTTCAGAACACCCAAAACCTTGTGGATTTTGCAATTATTGCATAGCACATGATATGGGCAAGAGTAGAAATATAAGGGAAGTAGGTCCAGTTAGTAATTTTGACTTTGAGAGCATCATGGACCTACTCGACAATATGATCGTTTCCCAGCTTCCATCACATTACAGAGTGTTTATTTTTGATGACTGTGATACTCTGTCAACAGATTGTTGGAATGCTATATCGAAGGTCATTGATCGAGCACCTAGACGTGTGGTTTTTATCCTTGTCAGTTCTAGTCTTGATGTCTTGCCTCATATAATAATATCTAGGTGTCAAAAATTCTTTTTCCCAAAGCTGAAAGATGCAGATATTATATGTACACTGCAGTGGATTGCAACCAAAGAAGGTCTAGAAATTGATAAGGATGCCCTGAAACTCATTGCATCAAGGTCAGATGGATCTTTGAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGGCAGAGAGTATCAGTTCCTCTTGTTCAGGAACTGGTAGGGCTAATCTCTGATGAGAAATTGGTGGATTTGCTTGATTTGGCATTATCTGCAGACACAGTAAATACTGTGAAGAATTTGAGAGTGATCATGGAAACTGGTGTGGAGCCATTGGCTTTAATGTCACAACTTGCCACAAAAGGCGAAGAAGGAAGTTCTTCCGAAGACAACCATGTGATGTCCAAAGAAGACATGGAAAAGCTGCGCCTAGCTCTGAAAACTTTATCTGAGGCTGAGAAGCAGTTGAGGATGTCCAATGACAAGCTAACATGGTTGACAGCTGCCTTACTTCAGCTTGCTCCTGACCAGCAATATGTGTTGCCAACTTCATCTGATAATAGTTTCAACCATAGTCCCTTTGCTCTAAAAGATGCAGATGCAAGAGAAGCAACTAGACGGACTGGTAATCTTGTTGACATTCCTAACAAAGCGAGACGATTATCAATGGATGCAAGAATTGAAAATTTCCATGCTGGAAGCTCAGCAGATGGTATGACAAAGGGTCTTGGTTCTGAGAAAAAACGACATAGTGTGTCCGGTTTTACTCCTCAACATGCTCATTCGCAATCCACCGATAAGATTAGGATGAACGAGAGACAGATTTTGGGTAAAAACCGTAAAGAAATTGAAGAGATATGGTTAGAGGTGCTTGAGAGGATACAAGTTACTGGTCTGAAAGAGTTTTTGTTTAAAGAAGGCAAGCTCATTTCTGTTAGTTTTGGAGCAGCTCCAACTGTGCAGCTGATGTTTAGTTCTCAACTGACCAAATCTACTGCTGAGAAGTTTAGAGGTCATATCTTACAAGCATTTGAATCTGTCCTTGGATCTTCTATAACAATAGAAATTAGATGCGAGTCAAATAAAGATGCAGGCTCGGCTGTTCAACAGCCTCTTACATTGCCTGCTATCAATGATAGTGTGTCTCAGATTAGAGACTTTAGTGGTGTTGGCACTCGAGCTCATCCATCATTAACAGATTCTGTTGAAAAGAGAAGGGGTGAAATTGTAGAAGAAGCCACTTCTCAAGCAGAGCACAAGAATAATGAGCAGCAGGTTGATGCTCATGGAACATCTTATAAAAGTTTAGAAGGTACAAGTACAGGACAAGTATCAGCTTCTCCAAAAAAGGCAATTGTTAAGTCGCATTTAGACCAAAGAAAGCTTATGGAGCAAGGTCAAAGTCGAAGTCTTGTAAGAAGCAAAGTATCTCTTGCTCATGTAATCCAGCAGGCAGAAGGTCAGAGAAGTGGATGGTCAAAACGTAAAGCAGTTTCTATTGCTGAGAAGCTTGAACAAGAGAATCTGAGACTGGAGCCAAGATCAAGGAGCTTACTATGTTGGAAAGCATCACGAGTAACCCGGCGAAAGCTGTCACGCTTGAAAATTCGAACCCGGAAACCACGTGCACTGCTGAATCTTGTCTCATGTGGGAGATGTCTCGCTACAAAATCTCCAAGGTAG 3537 0.4286 MTRAVRSRVLKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRVENDAVSQGGRRSVGVERRKEGRRLSGTSPPLVSIGSSRVAPGEVGRGNDGITVPSERSSRSGIGEGRRVGREESGRKNDRPDFLDVSQEEPLNQAGKSLAEDVTSRHSESKERKSKQRGKNVRDVQVKTLSEQLNDVPLDSDDLASSNIHFRGRFPRQEKIIEEVEARMRSHSSGMNRGKRRKFRSTRRTRVATTSRDIGAECELSVASNSLAQASAHQKYHLEEADEFADEKFTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLKKGTFAANGRNISEMPVASERSSSCTKSDAEALPLLVEASGSHASTENACWDRDYSGELGLFGDNLFKHDIDSDLASEARSGDQHKLRGNRHSRHQSLTQKYMPRTFRDMVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCSSSEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFESIMDLLDNMIVSQLPSHYRVFIFDDCDTLSTDCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKFFFPKLKDADIICTLQWIATKEGLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRVSVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATKGEEGSSSEDNHVMSKEDMEKLRLALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYVLPTSSDNSFNHSPFALKDADAREATRRTGNLVDIPNKARRLSMDARIENFHAGSSADGMTKGLGSEKKRHSVSGFTPQHAHSQSTDKIRMNERQILGKNRKEIEEIWLEVLERIQVTGLKEFLFKEGKLISVSFGAAPTVQLMFSSQLTKSTAEKFRGHILQAFESVLGSSITIEIRCESNKDAGSAVQQPLTLPAINDSVSQIRDFSGVGTRAHPSLTDSVEKRRGEIVEEATSQAEHKNNEQQVDAHGTSYKSLEGTSTGQVSASPKKAIVKSHLDQRKLMEQGQSRSLVRSKVSLAHVIQQAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRTRKPRALLNLVSCGRCLATKSPR 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 187 209 - -
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 254 280 - -
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 852 884 - -
Mupr7589g00003 1178 CDD HLD_clamp_pol_III_gamma_tau 630 693 IPR045085 -
Mupr7589g00003 1178 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 459 879 - -
Mupr7589g00003 1178 NCBIfam DNA polymerase III subunit gamma/tau 456 791 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Mupr7589g00003 1178 Coils Coil 760 780 - -
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 91 209 - -
Mupr7589g00003 1178 Pfam DNA polymerase III, delta subunit 473 630 - -
Mupr7589g00003 1178 FunFam DNA polymerase III subunit gamma/tau 631 693 - -
Mupr7589g00003 1178 Gene3D - 448 627 IPR027417 -
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 146 171 - -
Mupr7589g00003 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 493 677 IPR027417 -
Mupr7589g00003 1178 Gene3D - 631 693 - -
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 259 275 - -
Mupr7589g00003 1178 SMART AAA_5 489 630 IPR003593 GO:0016887
Mupr7589g00003 1178 MobiDBLite consensus disorder prediction 438 457 - -
Mupr7589g00003 1178 FunFam DNA polymerase III subunit gamma/tau 452 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7589g00003 Mupr-Chr7589 18847 25255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7589g00003 456 784 Core DNA Replication Machinery Family AT1G21690 24.471 5.87e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7589g00003 - - gmx:100809005 2066.58