Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7588g00008 TGTTGTTTTCTTCTCTCTTTTCTCCATCTCCATATCCATGCCATTGAAGTCCACATAGCCATGGCATACAGCAATTGGTCTGATTCATTGCAAACCGAAACCCCACTCTTTTCTTACCCACAACCTTCGGTACCTTCACCATATCCTCCCCCGCCTTCTCACACTTCTCACTACCCCTCTTACCCTCAAAACCCTAATCCCCCTTCTTCTCTTCCCCTTAACCCTCCCGGGGTTGATTCCCACACCCCATTAAATTCTAATACCTATGTGGCTCATGATTCCCTTCCTAATTTGACCTATGCTCAGAACCCTGTTGTGGCTGATTCGATTTCGGTGGCGGTGTCTTCTGGGTACTACTTGGACCCGAATTGGGCTCCCTCTCTCCAGACTTGGGCTGCCAGAGAGGCTGTTAGGCAATTTGGCATTGACCCTTCTATCTATGCACCTGGTATCTCTATGCCATCCACTGGTTCAGAACAATTAGCTGTGGCAGATCCTAACTACAGTTGGTGGGCAAATACCACAACTCAAGCTCTTGTCAATGGAATACAGAAGAAAAACCAAAAGAAAGCTAAAACTAAGATTGTGCAATCTGCATATTGTGAAGTTTGCAAGATAGAATGCACGAGCAAGGAAGTACTGGACCAGCATAAATTAGGAAAGAAGCACAAGAAAAACTTGGAGAAACTAAGAGAATCATTGACATCAACCCAAGTTCAACCATCTGGATCATCTAATCCTGTAATAGGACCCCAATTACCAAACAAGACGAGTATACCCGTCGTCAGTGGGCAAAAGAGTAAGAGGAAAAAAGTTGAAACTGCAGAAGATCTAGAGAAAAAGAAAAGAAAGGTTCTTGATGGTGGGGCAGCAGCCGAAGCTGTTAGGATATGTGCTATATGTAATGTGGTGTGTAATAGCGACACAGTTTATAATTTTCATCTCGCAGGACAAAAGCATGCCGCTGTGCTGAAGAGAGTATCTGATCATACACAATCCAATGCCAGTTGA 1011 0.4431 CCFLLSFLHLHIHAIEVHIAMAYSNWSDSLQTETPLFSYPQPSVPSPYPPPPSHTSHYPSYPQNPNPPSSLPLNPPGVDSHTPLNSNTYVAHDSLPNLTYAQNPVVADSISVAVSSGYYLDPNWAPSLQTWAAREAVRQFGIDPSIYAPGISMPSTGSEQLAVADPNYSWWANTTTQALVNGIQKKNQKKAKTKIVQSAYCEVCKIECTSKEVLDQHKLGKKHKKNLEKLRESLTSTQVQPSGSSNPVIGPQLPNKTSIPVVSGQKSKRKKVETAEDLEKKKRKVLDGGAAAEAVRICAICNVVCNSDTVYNFHLAGQKHAAVLKRVSDHTQSNAS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7588g00008 336 Gene3D Classic Zinc Finger 182 230 - -
Mupr7588g00008 336 Gene3D Classic Zinc Finger 264 326 - -
Mupr7588g00008 336 SUPERFAMILY beta-beta-alpha zinc fingers 294 327 IPR036236 -
Mupr7588g00008 336 SMART ZnF_U1_5 293 327 IPR003604 GO:0003676|GO:0008270
Mupr7588g00008 336 SMART ZnF_U1_5 196 230 IPR003604 GO:0003676|GO:0008270
Mupr7588g00008 336 MobiDBLite consensus disorder prediction 234 264 - -
Mupr7588g00008 336 PANTHER ZINC FINGER PROTEIN 385B-LIKE 39 331 - -
Mupr7588g00008 336 MobiDBLite consensus disorder prediction 41 86 - -
Mupr7588g00008 336 SUPERFAMILY beta-beta-alpha zinc fingers 193 231 IPR036236 -
Mupr7588g00008 336 Pfam Zinc-finger of C2H2 type 298 320 - -
Mupr7588g00008 336 Pfam Zinc-finger of C2H2 type 200 223 - -
Mupr7588g00008 336 MobiDBLite consensus disorder prediction 234 277 - -
Mupr7588g00008 336 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7588g00008 Mupr-Chr7588 55081 57834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7588g00008 201 330 C2H2 Transcription Factor Family AT5G61190 31.507 1.49e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7588g00008 - - gmx:100814580 362.073