Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr755g00001 ATGAATGGAGGTAGAGGGTTTGTGGTGATGGAGAGTGGGTGGAAGCCTGAGGTTGAGATGTCACCAAATTGTCCTAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAATAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAGGGATGCAGAAGGTACTGGACCAAAGGAGGGTCACTCCGCAATGTGCCTGTTGGAGGTGGTTGCAGGAAAAATAGAAGAGGCAATAACAAGACCTTATTGAGACAATCCATTGATGGTTTCACTTTCAAGAATTCATCACCTTGTGGCAATATTGCTACAGATCATAATAATAACCCTGTTGGGCTTTCTTATGATCCTAGAACAAGGACTTGTTCAGCTTCCACCTCAGTGGTGAGTGATGGACCAAACATTGATCTTGCACTAGTCTATGCAAATTTCCTCAACCAAAAGCCAAAATTTGAAGCTGGGGTTGAGAGTAATCAAGATCAAGTGCAAACAGCTTTTGATCCCTTTCTTGAAAATAATTCAAGGCTATCAAACACAGATGTTGGCCCAAGTACTTTGCCTGAAGAACTTGTTCTAACACATTCTAGTGAGGGTAATATTAATGGCCAAATGTGCTATGGTGAGTTCAACTCTATGCAAATGCTTCAAAAGGATGGAATTGAGCAATGTAGTAGTCATGGTGGTGCTATGAATTTTGAGCTGCCACCATTGCCGGGTGAAGAGGAAGCCTCGCATGATCACATGATGTGGTCAAATTCTGAGATGATGATAAATCACCATGCGTTTCAAGTCACACAACCTCCACTTCTTGGGCCTGAAGTTCATGATGCAGACTTGTTAATAGTCGACGCGAAAATTGTGATGTTGATACTTCAACAGTAG 879 0.4232 MNGGRGFVVMESGWKPEVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNNKTLLRQSIDGFTFKNSSPCGNIATDHNNNPVGLSYDPRTRTCSASTSVVSDGPNIDLALVYANFLNQKPKFEAGVESNQDQVQTAFDPFLENNSRLSNTDVGPSTLPEELVLTHSSEGNINGQMCYGEFNSMQMLQKDGIEQCSSHGGAMNFELPPLPGEEEASHDHMMWSNSEMMINHHAFQVTQPPLLGPEVHDADLLIVDAKIVMLILQQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr755g00001 292 ProSiteProfiles Zinc finger Dof-type profile. 22 76 IPR003851 GO:0003677|GO:0006355
Mupr755g00001 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 187 IPR045174 GO:0003700|GO:0006355
Mupr755g00001 292 ProSitePatterns Zinc finger Dof-type signature. 24 60 IPR003851 GO:0003677|GO:0006355
Mupr755g00001 292 Pfam Dof domain, zinc finger 22 76 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr755g00001 Mupr-Chr755 2985 4558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr755g00001 14 277 C2C2-Dof Transcription Factor Family AT3G52440 42.647 1.28e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr755g00001 zf-Dof 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr755g00001 - - gmx:100794208 455.292