Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7558g00001 ATGTTGAAGTTAGTGTCATTTAAAGTGTTGTTAATTTTCTTCGTCCTAACATGTGTGTCTGCAAGTGCAAAAGGTAATAGGTTTACCAGATGTAGCTGTGATGAAGATGAGTCCAGCTTGGTGATTTTGGACACCATTCTGGTGTACCAGAGATTTGGTGATTTTCTGATTGCTATGGCCTACTTCTCCATCCCCATTGAGCTTCTTTACTTTGTTAGTTGCTCAAATTTTCCATTCAAATGGATTCTCTTTCAGTTCGTTGCTTTCATTGTACTCTGTGGAATGTCACATTTACTGAATGGGTGTACCTTTGGTTTCCAAAGTTTTACACTCATGGTGGCACTCACCATCTCCAAAATCCTCACTGCCCTGGTGTCATGTGCCACTTCCGTATCCCTCTTGACCATAATCCCTTTGCTGTTGAAAGTGAAGGTTAGAGAATTGATGCTGAAGAAGAAGACCTGCGATCTTGGGAGGGAGTTTGGAATCATAAGGAAGAAAAATGAGGCTGCAACGCATGTGAGAATGCTCACTCAAGAGATTCGAAAGTCGTTGGATAGGCATAAGATTCTCTACACAACCTTGGTTGAGCTGTCTAACACACTTGGTTTGCAAAACTGTGCAGTGTGGATGCCAAATGTTGAGAAAACTCACATGATCCTTACACATGAATTGAATACGAGGAGTGTTAGCTGTTCTATTCCCATAACTGATCCAGATGTTAAGAGAATTAAGGAAAATAATGAAGCATGCATTCTTGATTCCAATTCGATACTTGCCACTGCCAGCCATGGAGATTCTGGTGCGGCAGTGGTAGGACTAGGACCAGTTGCTGCAATCCGAATGCCAATGCTTCGGGTTAACGATTTCAATGGGGGAACGCCAGAGCTGAGGCAGACGTGTTATGCCATACTGGTTTTGATTCTTCCAATGACCGAGGATAGAGTGTGGAGCTTTTTCGAGCTGGAGACCATTAAGGTGGTTGCGGATCAGGTGGCTGTGGCTCTGTCACACGCCGCAATTCTTGAAGAGTCCCAGCTCATGAGGGAGAAGTTGGAGGAGCAGAATCATGCTTTGCAGCAGGAAAGGATGAGCGCGATGATGGCGACTCATGCAAAAGCTGCGTTTCAGAAGGGCGTGAATAATGGAATGAAAAGGCCAATACACTCAATTTTGGGCTTGCTTTCAATAATGCAGGATGAGGGTTTAAAGAGTGAACAGAAAATTATTGTGGATTCAATGGTAAGGGCCAGCAGTGTCTTGTCTAACTTGATAAATGATGCCATGGACCACACAGCAAGGGATGATGGAAGGTTTCCCTTGGATATGAAACCTTTTCGTTTGCATGCCATAGTGAGGGAGGCAGCTTGTCTTGCCAAGTGCATGTGTGTTTATAGGGGCTTTGGTTTTGTGCTTGATGTTGACAAGTATTTGCCAGACAATGTAGTAGGTGATGAGAAGAGGGTTTTTCAGGTGATTATGAACATGGTTTGGAATGCAATAAATGTCAACCATGGAGGAGGTGTTCTTGTATTTCGAGTTTTTGCCGGAACTGGAAGTCAAGGAAGGAATCATTACCAGGAATGGACAGCCTGGAGGTCAAGCTCTTCTAGTGGGGATGTAAATATTAGATTTGAGATAGGGATCAATACTGGTGATCCTAAACTGCAGAGCTTTGTTCCTTCAGGTACACGGCACGTCAGTGATGGGGTTGGGGGAAGGTTGAGCTTCGGCATTTCCAAGAGGATAATCCAGTTGATGCAAGGAAACATATGGTTAATACCAAATGCTCAAGGTTATCCTCAAGTCATGACCCTTTTTCTTCGGTTTCAACTGCCGCAGTCAATCGCCATAAGCATTCCGGAATCTGGGGAATGCCCAGATCCATCCAGTGCAAATTCCTTCTTCAGAGGGCTGCAAGTCTTGTTGGCAGACAGTGACGAGCAAAATAGAGCAGTAACCCAGAAGTTACTTGAGAGACTAGGCTGTGTTGTGACTCCTGTTTCCTCAGGGCTTGAATGCCTTAGCGTTATTGGACCTACTGTATCTTCCTTTCAACTCCTTCTTCTGGATCTTCACATGCTTGAGCTAGATGAATTTGAAGTTGCAAAGAGGATCTGCAAGTTCAGAAGCCCAAACTGGCCCACAATTGTTGCCTTGACTGCAAGCACAGAAGATTGGGAAAGATGCATGCAAATTGGCATAAATGGAGTCATAAGAAAGCCAGTTTTGTTGCATGAAATTGCTAGTGAACTCAGAAAAATCCTAATGCAGGGAAATAGTGGCATAATAGATATGGAGTATGGACTGTTGAGACTTGAGCTTAACAAAACAAAACAGATTAGTTCACCAGAAGAATTTTTTGGTTAG 2370 0.4367 MLKLVSFKVLLIFFVLTCVSASAKGNRFTRCSCDEDESSLVILDTILVYQRFGDFLIAMAYFSIPIELLYFVSCSNFPFKWILFQFVAFIVLCGMSHLLNGCTFGFQSFTLMVALTISKILTALVSCATSVSLLTIIPLLLKVKVRELMLKKKTCDLGREFGIIRKKNEAATHVRMLTQEIRKSLDRHKILYTTLVELSNTLGLQNCAVWMPNVEKTHMILTHELNTRSVSCSIPITDPDVKRIKENNEACILDSNSILATASHGDSGAAVVGLGPVAAIRMPMLRVNDFNGGTPELRQTCYAILVLILPMTEDRVWSFFELETIKVVADQVAVALSHAAILEESQLMREKLEEQNHALQQERMSAMMATHAKAAFQKGVNNGMKRPIHSILGLLSIMQDEGLKSEQKIIVDSMVRASSVLSNLINDAMDHTARDDGRFPLDMKPFRLHAIVREAACLAKCMCVYRGFGFVLDVDKYLPDNVVGDEKRVFQVIMNMVWNAINVNHGGGVLVFRVFAGTGSQGRNHYQEWTAWRSSSSSGDVNIRFEIGINTGDPKLQSFVPSGTRHVSDGVGGRLSFGISKRIIQLMQGNIWLIPNAQGYPQVMTLFLRFQLPQSIAISIPESGECPDPSSANSFFRGLQVLLADSDEQNRAVTQKLLERLGCVVTPVSSGLECLSVIGPTVSSFQLLLLDLHMLELDEFEVAKRICKFRSPNWPTIVALTASTEDWERCMQIGINGVIRKPVLLHEIASELRKILMQGNSGIIDMEYGLLRLELNKTKQISSPEEFFG 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7558g00001 789 CDD HisKA 384 430 IPR003661 GO:0000155|GO:0007165
Mupr7558g00001 789 Coils Coil 342 369 - -
Mupr7558g00001 789 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 426 596 IPR036890 -
Mupr7558g00001 789 Pfam GAF domain 186 336 IPR003018 GO:0005515
Mupr7558g00001 789 ProSiteProfiles Histidine kinase domain profile. 379 616 IPR005467 -
Mupr7558g00001 789 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 28 758 - -
Mupr7558g00001 789 Gene3D - 436 614 IPR036890 -
Mupr7558g00001 789 SUPERFAMILY CheY-like 636 756 IPR011006 -
Mupr7558g00001 789 Gene3D - 338 435 - -
Mupr7558g00001 789 ProSiteProfiles Response regulatory domain profile. 640 756 IPR001789 GO:0000160
Mupr7558g00001 789 Gene3D - 163 337 IPR029016 -
Mupr7558g00001 789 SUPERFAMILY GAF domain-like 189 339 - -
Mupr7558g00001 789 Gene3D - 625 758 - -
Mupr7558g00001 789 CDD HATPase_ETR2_ERS2-EIN4-like 478 608 - -
Mupr7558g00001 789 SMART gaf_1 186 346 IPR003018 GO:0005515
Mupr7558g00001 789 PIRSF Ethylen_sen_hybr_HK 1 763 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mupr7558g00001 789 FunFam Ethylene receptor 4 339 433 - -
Mupr7558g00001 789 SMART REC_2 639 752 IPR001789 GO:0000160
Mupr7558g00001 789 Pfam Response regulator receiver domain 641 750 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7558g00001 Mupr-Chr7558 11153 14817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7558g00001 26 756 Miscellaneous Gene Families AT3G04580 52.477 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr7558g00001 GAF 2.1e-10 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7558g00001 K14509 - gmx:100802948 1102.43