Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7526g00003 ATGGAGAGCAACGACATTCTAGAGGAGCTTCTCAACATCGAGGTTGAGATTCAAGATGTTCAAGAACAAATAAGGACCTTGATTGAGAGGCAAGAGAATTTGTACGAGAGAAAATCGGAGCTGAGTGCTATATTGGAAGCGTGTAAAGAATCTGGAAACGAGGCCAATAATGTGGCTTCAAGCACAGTGGAAAATTGGAGTGGGACATTTGAATGGGATTCTGAAGCAGATGATATTAGGTTGAATGTTTTTGGCATTTCGTCCTACCGTGCAAATCAAAGAGAGATAATTAATGCCATTCTGAGTGGAAGAGATGTTCTGGTGATCATGGCTGCAGGTGGTGGCAAGAGCCTCTGCTACCAGCTTCCTGCTGTTCTTCGTGATGGAATTGCTCTAGTTGTCAGTCCTTTGCTTTCCTTAATTCAAGATCAGGTAATGGGCTTGACTGCTTTGGGCATTCCAGCATATATGTTGACTTCAACAAATAAGGGAGATGAGAAGTTCATATACAAGGCTTTGGAGAAGGGTGAGGGGGAACTCAAAATATTGTATGTCACTCCAGAAAAGATATCAAAAAGCAAGAGGTTTATGTCAAAACTTGAAAAATGCCATCATGCTGGTCGGCTTTCTCTAATTTCAATTGATGAGGCACATTGCTGTAGTCAGTGGGGTCATGATTTTCGACCTGACTATAAAAACCTTGGTATTCTCAAGACACAGTTCCCTAATGTTCCTATGGTTGCTTTGACTGCAACTGCTACTCAGAGGGTCCAAAATGATCTGATAGAGATGTTGCATATTCCTAGATGTGTCAAATTTGTCAGCACAGTCAATAGGCCAAACTTGTTTTATATGGTAAAGGAAAAATCATCTGTTGGGAAGGTAGTCATTGATGAAATTGCAGAATTCATTCAAGAATCTTATCCAAATAATGAATCGGGGATTGTTTATTGCTTCTCTAGGAAGGAATGTGAACAGGTTGCAAAGGAGTTGAGGGAGAGAGGGATTTCAGCTGATTATTATCACGCAGATATGGATGTAAATGCTCGGGAAAAAGTTCACATGCGGTGGAGCAATAGCAAGCTGCAGGTCATAGTTGGTACAGTAGCTTTTGGTATGGGAATCAACAAACCAGATGTCAGGTTTGTCATCCATCACAGCTTGGGTAAATCAATGGAAACATACTACCAGGAAAGTGGTCGAGCTGGCCGAGATGGACTTGCTTCGGAATGCCTACTGTACTTTAGACCTGGTGATGTTCCCCGTCAGAGTTCAATGGTCTTCTACGAAAATTCAGGACTGCAGAATCTCTATGACATAGTACGATATTGTCAGTCCAAAAGACAATGCCGACGAAGTGCCTTTTTCCGGCATTTTGCTGAGCCACTACAAGAATGCAATGGGATGTGCGACATCTGTGCATTCTCAAGTGAGGTGAAGGAAGTGGATGTCACTGGTCATGCAAAGCTGATGGTTTCACTGTTGCAAGATATGCAAGCAAATGATCAGAGGTCAACAATGTTGCAATTAGTTGATAAAATGAAAATAAAACAGAAGGGACAAGGTTCTGAATTGAAACGAGAGGAAATTGAGCAGCTCATCTTACACCTTTTACTGGAGCGGTTTTTGAAAGAAGAATATCAGCATACAGCTTATGCCACAAATGCTTACATTGCTGTGGGTCCGTTGGCCAGGCAAATATTACAAGGGAAGAAATGTGTGAAACTTGAGATTTATACTGAACAGAGAACTAAAGCTGGTGTAAGATCGGTGAAACGCGGCCTTGGGTCCTCTGGTTTGGAGCTAAAGCTTGATGGGCTGAGAAAAGAACTGTCCTCTGCCCATGGAGGAATACTCCCACACTCTGTCCTATCCACTGAACAAATCAGCTTACTAAGCTCTCAAAAACCAAACTCACTGGAACAGGCAAGTTTTAAGTTTTGTAATTTATTGGAGAAGGTGATTGGAAAATTGAAGACGGAGAAGTATGGAAATAGAATACTTGAGCAAATTGAAAAATATTCTGATTTCAAGCCGACTGATAAACAAGGAACTGATGGTAGGGCTCCAAAGAGGTCCAAAACCAAGAAAAATCTTGTTCTCATTGAGAGTAGTGAAGATGAAGAA 2127 0.4151 MESNDILEELLNIEVEIQDVQEQIRTLIERQENLYERKSELSAILEACKESGNEANNVASSTVENWSGTFEWDSEADDIRLNVFGISSYRANQREIINAILSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTNKGDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPMVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHMRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLGKSMETYYQESGRAGRDGLASECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFSSEVKEVDVTGHAKLMVSLLQDMQANDQRSTMLQLVDKMKIKQKGQGSELKREEIEQLILHLLLERFLKEEYQHTAYATNAYIAVGPLARQILQGKKCVKLEIYTEQRTKAGVRSVKRGLGSSGLELKLDGLRKELSSAHGGILPHSVLSTEQISLLSSQKPNSLEQASFKFCNLLEKVIGKLKTEKYGNRILEQIEKYSDFKPTDKQGTDGRAPKRSKTKKNLVLIESSEDEE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7526g00003 709 FunFam ATP-dependent DNA helicase 598 676 - -
Mupr7526g00003 709 SMART helicmild6 325 406 IPR001650 -
Mupr7526g00003 709 SMART RQC_2 483 580 IPR018982 GO:0006260|GO:0006281|GO:0043138
Mupr7526g00003 709 MobiDBLite consensus disorder prediction 674 703 - -
Mupr7526g00003 709 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 271 IPR014001 -
Mupr7526g00003 709 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 296 445 IPR001650 -
Mupr7526g00003 709 Coils Coil 3 37 - -
Mupr7526g00003 709 CDD DEXHc_RecQ1 71 278 - -
Mupr7526g00003 709 CDD SF2_C_RecQ 279 415 - -
Mupr7526g00003 709 Pfam Helicase conserved C-terminal domain 302 405 IPR001650 -
Mupr7526g00003 709 Gene3D - 46 278 IPR027417 -
Mupr7526g00003 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 422 IPR027417 -
Mupr7526g00003 709 NCBIfam RecQ family ATP-dependent DNA helicase 82 505 IPR004589 GO:0004386|GO:0006310
Mupr7526g00003 709 Gene3D - 279 475 IPR027417 -
Mupr7526g00003 709 Pfam RQC domain 480 584 IPR018982 GO:0006260|GO:0006281|GO:0043138
Mupr7526g00003 709 FunFam ATP-dependent DNA helicase 479 579 - -
Mupr7526g00003 709 Pfam DEAD/DEAH box helicase 91 258 IPR011545 GO:0003676|GO:0005524
Mupr7526g00003 709 SMART ultradead3 85 287 IPR014001 -
Mupr7526g00003 709 FunFam ATP-dependent DNA helicase 279 475 - -
Mupr7526g00003 709 Gene3D HRDC domain 598 676 IPR044876 -
Mupr7526g00003 709 Pfam RecQ zinc-binding 418 474 IPR032284 -
Mupr7526g00003 709 FunFam ATP-dependent DNA helicase 48 278 - -
Mupr7526g00003 709 MobiDBLite consensus disorder prediction 674 709 - -
Mupr7526g00003 709 Gene3D - 479 579 IPR036388 -
Mupr7526g00003 709 PANTHER DNA HELICASE RECQ FAMILY MEMBER 67 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7526g00003 Mupr-Chr7526 20822 31648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7526g00003 84 420 Eukaryotic Initiation Factors Gene Family AT3G19760 19.602 3.41e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7526g00003 K10899 - gmx:100817635 1240.71