Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7524g00004 ATGGAGGATTCTTCAGCTGGTGAAGACACCAAGACTTGTCCCCGTGGTCACTGGAGACCCGCTGAGGATGAAAAGCTAAGACAACTCGTTGAACAATATGGTGCTCAAAACTGGAACTCAATCGCTGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGGTTAAGATGGTTCAATCAGCTTGACCCCAGAATTAACAGAAGACCCTTCACGGAAGAGGAAGAAGAGAGGTTACTCGCAGCACACCGCATTCACGGGAACAAGTGGGCCCTCATAGCGAGGCTTTTCCCTGGTCGAACCGATAATGCTGTGAAGAATCACTGGCATGTTATAATGGCGAGAAAACAAAGGGAACAGTCCAAGTTAAGTGGGAAGAGAAGTTTCCAAGATGCTTATAATGATTCCAACACTTCCTCGTTCCTTGAAAAAAGAACACCACAATCTCAAGAGCTGTTATTTAGTACGAGATTTGGGTTAGAGAATGGAAGATTCTTTGACTTTCGGAGCCTCGATAATAATAATAGGATAGTTGCAGATAATCCCTCTAGTTCTCTGGCGTCTTGGAATTTTGCTTCTTCTGTGCCAGCCTCCACAAACGGTTCTACTCTAGTGGATACACTTAGAAAAGGAGGGAGAGACTATTTCAACTCTAGTTCCTCTTGCTCTTCTAGTATTTACCTCTCAGAATGTTCCAGAAGCTCAGATAGGTCCTTTCTTTACAGAATTTATCCAAATCCTGCATTCTCACTTCCCAACTACAAGAGGGTTGTTCCAAGTCCTTTTAGTTTCCTCGCTTCTTCTGATGATGGAAGGATAAAGAGGGACTTGATAAGTTTCTGTGATAATAACTCATCCACATTCACAAAGTTGAAGGCTTCTACGGAGAAAGATCATCAACGAACCAATGAAGATGAAACCAATATCGAGCCCAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTTGGTGTCTCTTCATCATAA 981 0.4281 MEDSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLSGKRSFQDAYNDSNTSSFLEKRTPQSQELLFSTRFGLENGRFFDFRSLDNNNRIVADNPSSSLASWNFASSVPASTNGSTLVDTLRKGGRDYFNSSSSCSSSIYLSECSRSSDRSFLYRIYPNPAFSLPNYKRVVPSPFSFLASSDDGRIKRDLISFCDNNSSTFTKLKASTEKDHQRTNEDETNIEPKEVPFIDFLGVGVSSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7524g00004 326 CDD SANT 18 59 IPR001005 -
Mupr7524g00004 326 Pfam Myb-like DNA-binding domain 18 78 - -
Mupr7524g00004 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr7524g00004 326 SMART sant 14 63 IPR001005 -
Mupr7524g00004 326 SMART sant 66 114 IPR001005 -
Mupr7524g00004 326 FunFam MYB transcription factor 15 66 - -
Mupr7524g00004 326 FunFam MYB transcription factor 68 139 - -
Mupr7524g00004 326 SUPERFAMILY Homeodomain-like 14 108 IPR009057 -
Mupr7524g00004 326 Gene3D - 15 66 - -
Mupr7524g00004 326 ProSiteProfiles Myb-like domain profile. 15 61 IPR001005 -
Mupr7524g00004 326 MobiDBLite consensus disorder prediction 1 21 - -
Mupr7524g00004 326 PANTHER MYB PROTEIN-RELATED 15 154 - -
Mupr7524g00004 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 61 IPR017930 -
Mupr7524g00004 326 Gene3D - 69 130 - -
Mupr7524g00004 326 CDD SANT 69 109 IPR001005 -
Mupr7524g00004 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7524g00004 Mupr-Chr7524 18189 19559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7524g00004 13 122 MYB Transcription Factor Family AT1G17950 84.545 1.08e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr7524g00004 Myb_DNA-bind_6 2.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7524g00004 K09422 - gmx:100817328 513.072