Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7517g00004 ATGCAGCCCTGTAGCAGAGAAATGCAAGGAATTAACTCCCTCTTAAACTCCCCTCAAATCTCCCTCCAGGACCTCCACACCACCAACCAGATCCAAAATTCACACATGAATCACCAACAACAACAACTCAGCCACGCCACCCCTCACTTCGACCCAACCTCCCACGACGACTTCCTCGAGCAAATGCTCTCCTCCTGCGCCTGGCCTGACCTCAACCCAAACAAGCCCTTGTGGGATCCCAACCCGCCCAATTCCGACGAAACGACGCCGTCCAATAACGACAATAATGTCGTTTTCCCCTACGACGAACAAACCAGCTTGGCCTCCAAGTTCCGCAACCACCAGATCAGCGCCTCCACCACCAAAAACGCCGCCGCTCTCATGCTCCACCAGCAACTCCTCATGTCCCGAGCCCCGGACTCTGGCCTCCTCCACATGCCGCTCTCGCTGCCCGGAAACGACGTCGTTGACGCCTCCTCCTTCAAATCTCCCAATCCCGTACCACACTGTTACACTGGTGGTGAGGCTTCAGTGCAAGCTCTCTACAACGGCTTCGCCGGATCTCTGCATGGCGCGGTTCAAGCCTCGAACCAGACTCAGCATTTTCAACAACCTCAGGGAAGTTCGAATCCGATGCAGGGACAAAATTTTGGTGCAGCAGCGGGCGTGACGAACCAAGCTCCGGCGAGTGGCGCCACCGGTGGCACGCCGGCTCAGCCGAGGCAGAGGGTTCGTGCAAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCTGAAAGGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCCCTACAGGAACTGGTTCCCAATGCCAACAAGACAGACAAGGCATCCATGCTAGATGAGATCATCGATTACGTGAAGTTCCTGCAGCTCCAAGTCAAGGTGCGCTTCCCGCGTTTTACTCTTGTACTAGGTTCTAAGTATGGGCTTGTGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGCTGCTGTCGCTCCCCTTGTTGCTGATATGTCCTCTGAGGGAGGCGGTGACTGCATCCAAGCGAACGGCAACAGTAACGGCGGTGCACCGAACTCCAACAACAACCAAACGACAGCGTCAACCTCAAATGACAGCCTCACCATGACGGAGCACCAGGTAGCGAAACTCATGGAGGAGGACATGGGTTCCGCCATGCAGTACCTTCAAGGCAAGGGCCTTTGCCTCATGCCCATTTCCCTCGCCACTGCCATCTCTACTGCCACGTGTCACACCAGGAACCCCTTGATCAACGCCGCCTCCGGCAGCGGCCAGATTCCGACCAACGCCGCCGCCGGCACCCACGCCAACCCCACCGTCGCATCCAACGCCGATGGCCCGTCCTCTCCGAGCATGTCCGTGCTGACGGTGCAATCCGCCGTGGTGGGTAACGACGGCGCCGTCAAGGACGCTGCCTCCGTTTCGAAGCCGTGA 1464 0.5772 MQPCSREMQGINSLLNSPQISLQDLHTTNQIQNSHMNHQQQQLSHATPHFDPTSHDDFLEQMLSSCAWPDLNPNKPLWDPNPPNSDETTPSNNDNNVVFPYDEQTSLASKFRNHQISASTTKNAAALMLHQQLLMSRAPDSGLLHMPLSLPGNDVVDASSFKSPNPVPHCYTGGEASVQALYNGFAGSLHGAVQASNQTQHFQQPQGSSNPMQGQNFGAAAGVTNQAPASGATGGTPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVRFPRFTLVLGSKYGLVVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGNSNGGAPNSNNNQTTASTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINAASGSGQIPTNAAAGTHANPTVASNADGPSSPSMSVLTVQSAVVGNDGAVKDAASVSKP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 197 257 - -
Mupr7517g00004 487 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 248 305 IPR036638 GO:0046983
Mupr7517g00004 487 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 66 415 - -
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 197 237 - -
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 81 95 - -
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 35 55 - -
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 74 95 - -
Mupr7517g00004 487 Pfam Helix-loop-helix DNA-binding domain 255 300 IPR011598 GO:0046983
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 349 376 - -
Mupr7517g00004 487 SMART finulus 256 305 IPR011598 GO:0046983
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 438 462 - -
Mupr7517g00004 487 FunFam Transcription factor bHLH66 247 310 - -
Mupr7517g00004 487 MobiDBLite consensus disorder prediction 35 49 - -
Mupr7517g00004 487 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 250 299 IPR011598 GO:0046983
Mupr7517g00004 487 Gene3D - 245 306 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7517g00004 Mupr-Chr7517 18652 21971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7517g00004 227 486 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 58.214 1.68e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr7517g00004 HLH 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7517g00004 - - gmx:100807286 627.861