Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7513g00004 ATGTCATTCCGCAGCATAGTTCGTGATGTGAGGGATAGTTTTGGGAGCTTATCTAGGCGTAGTTTTGATGTCAGACTTACCGGTCATCATAGAGGAAAATCTCAAGGATCGGTGCAGGATTTGCATGATCAACCTCTAGTACTTCAAAATAGCCGCTGGGCGAGCTTACCCCCGGAATTACTATTTGATATCATTAGACGGCTAGAGGAGAGTGAGAATGCGTGGCCTGCACGAAAGCATGTTGTTGCATGTGCGGCAGTTTGCCAGTCTTGGAGGAATATGTGCAAGGAAATTGTTAAAAGCCCAGAGTTTTGTGGCAAACTTACATTCCCTGTGTCCTTGAAGCAGCCGGGGCCACGGGATGGAATCATTCAATGTTTTATCAAAAGAGATAAATCTAATTTAACATACCACCTATTCCTTTGTCTCAGCCCTGCTTTGTTAGTTGAAAATGGCAAGTTCCTCCTTTCTGCTAAGAGGACAAGGAGGACAACTTACACCGAGTATGTTATTTCCATGGATGCTGACAACATCTCTAGATCAAGTAACACTTACATCGGAAAGCTGAGATCAAATTTTCTTGGTACAAAATTCATTATATACGATACACAGCCTCCATACTCTTCTGCCCATATATGCCCTTCTGGGACTGGGAAGACGAGCCGCAGATTTTATTCCAAAAAGGTCTCGCCAAAGGTCCCATCTGGGAGTTACAACATAGCTCAGGTAACATATGAATTAAACGTGCTTGGGACTCGAGGCCCCAGAAAGATGCACTGCGTGATGCATTCCATACCAGCTTCAGCTCTTGATGTGGGTGGCAGTGTTCCTGGCCAACCAGAGCTTCTTCCGCGCTCTCTTGAGGACTCGTTCCGGAGCATCTCCTTTTCAAAGTCTCTAGATCGTTCTATTGAGTTCAGCAGCTCGCGATTTTCTGAGATTGGGGAATCCTGCAATGAGGATGATGATGGCAAGATGAGACCCTTGGTCCTCAAAAACAAGCCTCCAAGATGGCATGAACAGTTACAATGTTGGTGCCTTAATTTTCGTGGACGAGTAACGGTTGCTTCTGTCAAAAACTTTCAGTTGATTGCTGCCACCCAACCCGCCGCCGGTGGACCAACACCTTCTCAACCGGCTCCACAGGAGCATGATAAGATTATTCTTCAGTTTGGCAAAGTTGGGAAAGACATGTTCACCATGGATTACCGGTACCCTTTATCTGCATTCCAAGCTTTTGCAATATGTTTGAGCAGCTTTGACACCAAATTG 1272 0.4552 MSFRSIVRDVRDSFGSLSRRSFDVRLTGHHRGKSQGSVQDLHDQPLVLQNSRWASLPPELLFDIIRRLEESENAWPARKHVVACAAVCQSWRNMCKEIVKSPEFCGKLTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPYSSAHICPSGTGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCVMHSIPASALDVGGSVPGQPELLPRSLEDSFRSISFSKSLDRSIEFSSSRFSEIGESCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGGPTPSQPAPQEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7513g00004 424 Pfam F-box domain 53 100 IPR001810 GO:0005515
Mupr7513g00004 424 Gene3D Tubby Protein; Chain A 112 421 IPR025659 -
Mupr7513g00004 424 FunFam Tubby-like F-box protein 48 101 - -
Mupr7513g00004 424 Gene3D - 48 101 - -
Mupr7513g00004 424 ProSitePatterns Tub family signature 1. 349 362 IPR018066 -
Mupr7513g00004 424 SUPERFAMILY Tubby C-terminal domain-like 102 424 IPR025659 -
Mupr7513g00004 424 Pfam Tub family 114 422 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 237 264 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 349 365 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 331 348 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 169 185 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 185 209 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 405 424 IPR000007 -
Mupr7513g00004 424 PRINTS Tubby superfamily signature 384 403 IPR000007 -
Mupr7513g00004 424 FunFam Tubby-like F-box protein 110 424 - -
Mupr7513g00004 424 CDD F-box_AtTLP-like 53 97 - -
Mupr7513g00004 424 PANTHER TUBBY-RELATED 30 424 - -
Mupr7513g00004 424 SUPERFAMILY F-box domain 48 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7513g00004 Mupr-Chr7513 27095 29838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7513g00004 1 424 TUB Transcription Factor Family AT1G76900 70.370 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mupr7513g00004 Tub 3.3e-118 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7513g00004 K19600 - gmx:100814578 824.313