Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7511g00003 ATCCCTCTGAAGCTGATCAGAGCCGGAGTCCTTGTACTGGGCGTCGATCTGGAGGAAGGTCTGGACGTAGCGTGCGGCGGACTCGTAGTCCTCGGATTCGAGGGCGCGGTGGACGCCTTCGAGGGAGTTGGCGCGGTCGACGATGGCGTCGATGCGGAGGAGCGTGGAGCGGACGCGGGACTGGGCGAGGTCGAGCTCGCGGACCTTGCGGCTAACGTGGTCGGCGAGGTCGGAGGTGGAGGCGACGTTGGAGAGCATGTAGTCGGAGTCGGAGTTGACGATGTCGAGGACGTCGGAGGAGCGCTGGAGCGAAACATGGCAGCTAATGTTACTCTCCCTCTCGCCTTCACTTCTTCCTCGTTACTGAAGCACAAGTCCCAATTCGGAGCTGCTCCGAAACGAATCGTTTCCTGTTCTGCGGGCCCGTTTTCTTTCTCTTCTTCTTCTTTGTGTCTTGTCGCGGGGTGCAGCTCCAAGGCTAGGGCTTTCACTGCCTCGGCGGCGACGGCGGATGAAGAAACGGTGGTTGTCGGAGGAGAACACGTGGAGGAAGAAACGTGGAAGCAGCAAAGAGCAACCGAAGTGTACGTGTGCAACCTTCCAAGAAGCTGTGACACACAACAGTTACTTTGTATGTTCAATCCTCACGGAACCGTTTTGTCTGCCGAGGTTTGCCGGAGTGCGGAGACTGGTGAAAGTAGAGGAAGTGGTTATGTGACAATGGCATCTATTAACTTGGCTAAAAATGCAATTGCTGCATTGGATGGCTCGGATGTTGGTGGGCGCGAAATGCGGGTTAGATTTTCTGCTGAGATGAATCCTAGGAGGAGGAATCTTGGTACAATGAACTCGGCACCCAAGAGAGTTATATTCTATGAAGGTCCTCATAAGTTGTATGTTGGGAATCTTTCCAGGGCTGCTAGGCCTGAAGACTTGAGGCAGCTTTTTGGTAGATTTGGTAATGTGGCTAGTGTAAGGGTGTTACAAGATTTGAGACAAGGGAAACACAGGGTCTACGCGTTTGTCTCTTATCTTTCAGAGAGAGAACGTGATGCAGCAAAGTCCCTCCATGGAACAGAATTTTGTGGCCGTACGCTAGTGATTAGAGAGGGTGTAGAGAGAGAGGACTGA 1131 0.534 IPLKLIRAGVLVLGVDLEEGLDVACGGLVVLGFEGAVDAFEGVGAVDDGVDAEERGADAGLGEVELADLAANVVGEVGGGGDVGEHVVGVGVDDVEDVGGALERNMAANVTLPLAFTSSSLLKHKSQFGAAPKRIVSCSAGPFSFSSSSLCLVAGCSSKARAFTASAATADEETVVVGGEHVEEETWKQQRATEVYVCNLPRSCDTQQLLCMFNPHGTVLSAEVCRSAETGESRGSGYVTMASINLAKNAIAALDGSDVGGREMRVRFSAEMNPRRRNLGTMNSAPKRVIFYEGPHKLYVGNLSRAARPEDLRQLFGRFGNVASVRVLQDLRQGKHRVYAFVSYLSERERDAAKSLHGTEFCGRTLVIREGVERED 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7511g00003 376 SUPERFAMILY RNA-binding domain, RBD 294 374 IPR035979 GO:0003676
Mupr7511g00003 376 PANTHER OS02G0815200 PROTEIN 137 369 - -
Mupr7511g00003 376 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 193 271 IPR000504 GO:0003723
Mupr7511g00003 376 SMART rrm1_1 297 369 IPR000504 GO:0003723
Mupr7511g00003 376 SMART rrm1_1 194 267 IPR000504 GO:0003723
Mupr7511g00003 376 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 298 366 IPR000504 GO:0003723
Mupr7511g00003 376 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 195 265 IPR000504 GO:0003723
Mupr7511g00003 376 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 296 373 IPR000504 GO:0003723
Mupr7511g00003 376 Gene3D - 279 376 IPR012677 -
Mupr7511g00003 376 Gene3D - 157 278 IPR012677 -
Mupr7511g00003 376 SUPERFAMILY RNA-binding domain, RBD 192 284 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7511g00003 Mupr-Chr7511 8289 13496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7511g00003 161 376 Eukaryotic Initiation Factors Gene Family AT3G16380 28.959 2.26e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7511g00003 - - gsj:114400287 352.829