Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7504g00020 ATGAAGAAGAAGGTGGTGGGTAGGAAAAACAAACGGGTTTTCTTCCTTTGGTGGTTTGGAATGACTCTGTGGCTTTGTTTCTTGCTGGGTGCCTGTTCTGAGAAAACAACATTTAGAAGGAGTTTAAGAGAAAGAGCCATCCACAATCAGCAATCGACAACGTCCAAATCTATGGTCACACTAAATACAAAGAACCGTCAACAGTTGGTGGTTGAAAATGGTATTGTTTCCCTCACTTTTTCAAGACCTGAGGGCTACATCCTTGGAATGTCATACAACGGAAATGACAATATACTTGAAGATGAAAACGAAGATCAAGATAGAGGGTACTTGGACGTAGTTTGGAATATACCAGGAAAGCCTAGTAATTTTCAGAGAATCCACGGGACAAAATGTTCGGTTATAGCAGCAGATGAGAATCTAGTGGAGCTTTCATTTTCAAGAACATGGACATCTTCCATGAATGGCTCAAGTGTCCCCATGAACATTGACATAAGATACATTTTGCGAAGTGGTGATTCAGGATTTTATTCATATGCAATATTTGACCGCCCCGAAGGATTGCCCGCGGTGGAGGTTGATCAAATTAGGATTGTTTTCAAACTCAAGAAAGACAGGTTCAACTATATGGCTATGTCAGATAAAAGGCAAAGAAACATGCCAACGATGAGAGATAGAGAAACTGGCCAAATCCTGGCTTTTCCCGAAGCAGTCCTATTAACAAGACCAATGAACCCAGAATTTAGAGGAGAGGTGGATGACAAATACCAGTACTCATGTGAGAACGCCGTTAACACTGTGCATGGATGGATCAGTGTTGATTCTAATGAACCCGTGGGTTTTTGGATGATAACACCCAGCAACGAGTTTCGCAATGCTGGGCCCGTCAAGCAAGACCTTACTTCCCATGTTGGCCCCATCACCCTCGCGATGTTTGTGAGTACTCACTATGCTGGCAAGGAGGTAACGATGTCATTTCAAGATGGGGAGATTTATAAAAAGGTTTTTGGCCCTGTATTTGCCTACGTTAATTCTGCTTCAAGGGAGGATGATACACTATCTCTCTGGTCAGATGCTGTGCAGCAGCTATCCAAAGAAGTCAAAAGTTGGCCTTACGATTTTCCTCAATCAAAAGATTTTTTTCCACCCAGTCAAAGGGGAATAGTTTTGGGAAGATTACTAGTCCAAGATTGGTACTTCAGAGGAGGTAAACTTGTATGTGCTAGCAATGCTTATGTTGGTGTAGCTTTGCCTGGTGATGCGGGATCATGGCAGATAGAAAGCAAGGGCTATCAATTCTGGACTCAAGCCGACACAGAGGGTTTCTTCCTAATAAATAATGTTGTGCCTGGTGACTATAATTTGTATGCATGGGTTCCTGGCTTCATTGGTGATTACAGATATAATGCTACAATCACCATCACACCAGGAGGAGTCATCAAATTGGATTCACTTGTGTATAATCCTCCAAGAAATGGATCAACCTTATGGGAAATTGGGTTTCCAGATCGCACGGCTGCAGAATTCTATGTACCAGACCCGTACCCTACGCTCATGAACAGATTATACAGCGAACAGCGCAGAGACAAGTTTAGGCAATACGGATTGTGGGAACGTTACACTGATTTATATCCAAATGATGATCTTGTTTACACCGTTGGTGTTAGCAAGTATAATAAAGATTGGTTTTATGCTCATGTTACGAGAAACATGGGAAATAAGACATACCAGCCAACGACATGGCAAATTATATATGACAATCGAGGTCCAATAATAAGAGGAAACTACACATTGCAACTGGCCTTGGCGTGTACCGCCGATGCTGACCTACAGGTTCGGTTCAATGATCCAAGCGCTAATCCCCCAGACTTTGCAACGGGGAAAATAGGAGGAGATAGTGCCATAGCACGGCATGGTCTCCATGGATTGTATAGGCTATTCAGCATTAACATACCAAGTGATCATATTGTGAAAGGAAAGAACACCATCTATCTTAGGCAGTCAAGAGCCATGAATCCTTTTCAAGGAGTTATGTATGATTATATCCGTTTAGAACGACCTCCTTTAACGGAAGGCATGATTAGCTAG 2088 0.4243 MKKKVVGRKNKRVFFLWWFGMTLWLCFLLGACSEKTTFRRSLRERAIHNQQSTTSKSMVTLNTKNRQQLVVENGIVSLTFSRPEGYILGMSYNGNDNILEDENEDQDRGYLDVVWNIPGKPSNFQRIHGTKCSVIAADENLVELSFSRTWTSSMNGSSVPMNIDIRYILRSGDSGFYSYAIFDRPEGLPAVEVDQIRIVFKLKKDRFNYMAMSDKRQRNMPTMRDRETGQILAFPEAVLLTRPMNPEFRGEVDDKYQYSCENAVNTVHGWISVDSNEPVGFWMITPSNEFRNAGPVKQDLTSHVGPITLAMFVSTHYAGKEVTMSFQDGEIYKKVFGPVFAYVNSASREDDTLSLWSDAVQQLSKEVKSWPYDFPQSKDFFPPSQRGIVLGRLLVQDWYFRGGKLVCASNAYVGVALPGDAGSWQIESKGYQFWTQADTEGFFLINNVVPGDYNLYAWVPGFIGDYRYNATITITPGGVIKLDSLVYNPPRNGSTLWEIGFPDRTAAEFYVPDPYPTLMNRLYSEQRRDKFRQYGLWERYTDLYPNDDLVYTVGVSKYNKDWFYAHVTRNMGNKTYQPTTWQIIYDNRGPIIRGNYTLQLALACTADADLQVRFNDPSANPPDFATGKIGGDSAIARHGLHGLYRLFSINIPSDHIVKGKNTIYLRQSRAMNPFQGVMYDYIRLERPPLTEGMIS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7504g00020 695 SUPERFAMILY Galactose mutarotase-like 63 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mupr7504g00020 695 Pfam Rhamnogalacturonate lyase family 53 252 IPR010325 -
Mupr7504g00020 695 SUPERFAMILY Galactose-binding domain-like 492 685 IPR008979 -
Mupr7504g00020 695 Gene3D - 492 685 - -
Mupr7504g00020 695 Gene3D - 51 357 IPR014718 GO:0030246
Mupr7504g00020 695 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Mupr7504g00020 695 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 60 688 - -
Mupr7504g00020 695 FunFam Rhamnogalacturonate lyase B 382 482 - -
Mupr7504g00020 695 CDD RGL4_M 385 485 IPR029413 -
Mupr7504g00020 695 Pfam Polysaccharide lyase family 4, domain II 409 481 IPR029413 -
Mupr7504g00020 695 Gene3D - 382 484 - -
Mupr7504g00020 695 CDD RGL4_C 497 685 - -
Mupr7504g00020 695 SUPERFAMILY Starch-binding domain-like 381 484 IPR013784 GO:0030246
Mupr7504g00020 695 Pfam Polysaccharide lyase family 4, domain III 495 684 IPR029411 -
Mupr7504g00020 695 CDD RGL4_N 68 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7504g00020 Mupr-Chr7504 29752 37511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7504g00020 57 687 Polysaccharide Lyase AT1G09890 53.858 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7504g00020 K18195 - gmx:100776664 1238.02