Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7497g00001 ATGAATTTCAACATTGATTCATCAGACCATAAACAGGACCAAAGTAAAAAAGGAAAGCTACCTGATGCTGATGATTCTCCAACTCTTAAATTGCCGTGTTCCAATTTGAACCCCAGAAGGTATCAGTTAGAGGTGCTGGAAGTTGCAAGGAGAAGGAACACAATAGCTGTGTTGGATACAGGGTCTGGTAAGACCTTGATTGCTGTGATGCTTATGAAAGAGGTTGGTCAAGCCATCAAGACTGATGGTGTAAAGAAGCTGATTATTTTCTTGGCTCCCACAGTTCATCTTGTCAATCAGGCATGTTTTTTTTCCCCTTCTTTCTGCTTTTGCTTTCCTTTACAATTCAAGAATATAAAATATTTGACAAATTTTCAAGTTGAGGAATACTATGGTGCTAAAGGAGTTGATACATGGAATTTGACGACGTGGGAAAAGGAGATTAGTAACAATGATGTACTGGTTATGACACCCCAGATTCTTTTGGATGCCTTAAGAAAAGCATACCTGCGTATAGAAATGATTTGCTTGATGATTATTGATGAATGTCATAGAGCAACTGGCAACCATCCATACGAATTTTATCACCAAATTAATGAAAAACCAAAGATCTTCGGGATGACAGCATCACCAGTAGGTAAAAAAGGTGTTTCCTCTACTGTGGATTGTGAGAATCAGATATCAGAACTTGAAAGCATCTTGGATTCTCGGAGATATACTGTTGAAGATCGTACAGAGATGGATCGATGTATCCCGTCTGCTAAGGAGAGTTGTAGATTTTATGACCAAGCACGGTCTTCTGCTTTGAGTTTGAAACCAAAGATTGAGGCCTTGTGGTTCAAGTTTGATGCATTGTTATCAGAAAATCGAAGTAACTATAAGGATGTGGACGATAAATTTAAGACACTGTCTCAGCGGATGTCCAAGGAACTTGCAAAAATTTTACATTGCCTTGAAGATCTTGGGATCCTATGTGCTTATGAGGCTGTTAAAATCTGTCATGAAAATTTCTCCAAAATTGAAGGAGAGTGTGAAATTTACAGAAAAGGTTATCTTCAGTGTATAAATTTTGTTGAAGAAGTAATGAAAATAATCAAAGAATCCCTCCATCATGCTGATAAAAATGTTTTGGATGTTGATTTTGATTATTCAAAGGCAGAAGATTTGGGTTACATATCTCCAAAATTACTTGAACTTATTAACCTCTTCCAGTCATTTGGAGAATCTAGTCAGGTGTTGTGCCTTATTTTTGTTGATAGAATAATTACAGCTAAGGTGATTGAAAGATTTGTGAAGATAGTTCCCCAGATTTCTCATTTCACAGTTTCCTATTTAACTGGAAACACTACATCAGTAGATGCTCTGGCTCCTAATAGGCAGAAGGAGATATTGGATTCTTTTCGCTCTGGAAAGGTCAATATATTATTTACTACTGATGTACTTGAGGAAGGAATTCATGTGCCAAACTGCTCTTGTGTTGTACGTTTTGATCTCCCAAAGACAGTTCGAAGTTATGTCCAATCTCGTGGAAGATCTAGGCAGGTTAACTCCCAATTTGTTGTGATGGGAAACTTGGAGCAAAGAAATCAACTCTTTAACATCATTAGGAGTGAGCGCTCCATGACTGATGCAGCTATTAGTAAAGACCATGTATCTAGTTTAAGGGCATTCACAGTGGGAAAAACAAATGCATACTGTGTGGAATCTACTGGAGCTTCTGTCACTTTAGATTCTAGTGTTGGTCTTATCAACAGATACTGTGAAAAGCTCCCACGAGATAAGTACTCCTGTGCAAAGCCCAGTTTTGCATCTATGCCTGTGGAAGGTGGTTACCAATGTAAATTAATATTACCACCTAATGCAGCTTTCCAAACAATAATTGGTCCTTCAGGAAAAGATGTGCGTTTGGCAAAGCATCTTGCATGTTTCGAAGCTTGTAAGAAGCTTCATCAAATGGGTGCCTTAAATGATCATCTGGTTCCGTTCCTTGAAGATCCTTCAGAAGATGACCATATTGTGAAAAACAAAGAATCAAGTTCTGGAGCAGGAACAACAAAAAGAAAGGAGTTACACGGAACAGCCAACATTCGTGCATTAAGTGGTGCATGGGGGGACAAACTCAATAGAACCAAATTTCATGCCTATAAATTTGAATTCACATGTAATATTATTAGTGAAATATACTCTGGGTTTGTTCTTTTGATCGAGTCAAAGCTTGATGATGATGTGGGAAATGTAGAATTAGATCTTTATTTAGTCTCAAAGATCGTGAAAGCTTCTGTATCTTCGTGTGGGCAAGTTGATTTGGATGCTGAACAGATGATGAAAGCAAAATGCTTCCATGAGCTTCTTTTCAATGGTTTGTTTGGGAGATTGTTTGGCGGGTCCAAATCAGCAGGAGGGGAAAGGAAATTTTTACTTCAGAACGACACAAAATCATTGTGGAGCCCAAAACACTTATATTTGCTTCTACCACTTGAGAAATTGAATGATATCTGTGAGGGATCCTTGCAAATAAATTGGTGTGGAATCAATTCTTGTGCTGCTGCTATTGAATTTTTAAGGAGGAAAATTTCTATGGTAACTGGAGATTTTGATGATAGCGGCCCCATCACAACACCTCATAATACCAGTTCATCGGAGATGGAATGTGAAGGAACGAACAAGATTCACTTTGCTAATTGTGTGGTTGATGCTGATAATATAAAAGACATGGTAGTTTTGGCCATTCACACTGGGAAAATATATTGTATTATTGAGATGGACAGTAACCTGTCTGCTGAAAGTCCTTTCGATGGATACAATGAAAAATCGAAGGAATGCATTACCTTCTCAGATTATTTCAGCAAAAGGTATGGGATTACACTGAGACATCCAGGACAGCCTCTGTTACGATTGAAGCAAGGTCATAATCCACACAATCTTCTTTTTAACTTCCACGAGGAAGATGCACAACAAAAGTCATCACAAATTGGCTCTGCAACCTCAAAAGTGCCAGCACATGTTCACATTCCACCTGAGCTTCTATGCGTTCTTCATGTTAAAAGAGATGTGTTGAAGTCACTATACTTGCTTCCATCTCTTATGTACCGCATTGAATCTTTAATGTTATCCAGTCAGCTTAGAGAAGAGATAGATGGTCAAACTAGCAAGTTCAACATACGTAGCTCACTG 3174 0.3822 MNFNIDSSDHKQDQSKKGKLPDADDSPTLKLPCSNLNPRRYQLEVLEVARRRNTIAVLDTGSGKTLIAVMLMKEVGQAIKTDGVKKLIIFLAPTVHLVNQACFFSPSFCFCFPLQFKNIKYLTNFQVEEYYGAKGVDTWNLTTWEKEISNNDVLVMTPQILLDALRKAYLRIEMICLMIIDECHRATGNHPYEFYHQINEKPKIFGMTASPVGKKGVSSTVDCENQISELESILDSRRYTVEDRTEMDRCIPSAKESCRFYDQARSSALSLKPKIEALWFKFDALLSENRSNYKDVDDKFKTLSQRMSKELAKILHCLEDLGILCAYEAVKICHENFSKIEGECEIYRKGYLQCINFVEEVMKIIKESLHHADKNVLDVDFDYSKAEDLGYISPKLLELINLFQSFGESSQVLCLIFVDRIITAKVIERFVKIVPQISHFTVSYLTGNTTSVDALAPNRQKEILDSFRSGKVNILFTTDVLEEGIHVPNCSCVVRFDLPKTVRSYVQSRGRSRQVNSQFVVMGNLEQRNQLFNIIRSERSMTDAAISKDHVSSLRAFTVGKTNAYCVESTGASVTLDSSVGLINRYCEKLPRDKYSCAKPSFASMPVEGGYQCKLILPPNAAFQTIIGPSGKDVRLAKHLACFEACKKLHQMGALNDHLVPFLEDPSEDDHIVKNKESSSGAGTTKRKELHGTANIRALSGAWGDKLNRTKFHAYKFEFTCNIISEIYSGFVLLIESKLDDDVGNVELDLYLVSKIVKASVSSCGQVDLDAEQMMKAKCFHELLFNGLFGRLFGGSKSAGGERKFLLQNDTKSLWSPKHLYLLLPLEKLNDICEGSLQINWCGINSCAAAIEFLRRKISMVTGDFDDSGPITTPHNTSSSEMECEGTNKIHFANCVVDADNIKDMVVLAIHTGKIYCIIEMDSNLSAESPFDGYNEKSKECITFSDYFSKRYGITLRHPGQPLLRLKQGHNPHNLLFNFHEEDAQQKSSQIGSATSKVPAHVHIPPELLCVLHVKRDVLKSLYLLPSLMYRIESLMLSSQLREEIDGQTSKFNIRSSL 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7497g00001 1058 SMART PAZ_2_a_3 879 1037 IPR003100 GO:0005515
Mupr7497g00001 1058 FunFam Endoribonuclease dicer-like 1 574 670 - -
Mupr7497g00001 1058 Pfam PAZ domain 898 1034 IPR003100 GO:0005515
Mupr7497g00001 1058 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 579 669 IPR005034 GO:0016891
Mupr7497g00001 1058 ProSiteProfiles PAZ domain profile. 899 1013 IPR003100 GO:0005515
Mupr7497g00001 1058 Pfam Dicer dimerisation domain 579 664 - -
Mupr7497g00001 1058 Gene3D - 386 549 IPR027417 -
Mupr7497g00001 1058 FunFam Endoribonuclease dicer-like protein 33 280 - -
Mupr7497g00001 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 513 IPR027417 -
Mupr7497g00001 1058 Gene3D - 33 277 IPR027417 -
Mupr7497g00001 1058 FunFam Endoribonuclease dicer-like 1 386 546 - -
Mupr7497g00001 1058 Pfam Helicase conserved C-terminal domain 398 512 IPR001650 -
Mupr7497g00001 1058 SMART helicmild6 428 515 IPR001650 -
Mupr7497g00001 1058 PANTHER DICER-RELATED 52 1054 - -
Mupr7497g00001 1058 SUPERFAMILY PAZ domain 899 1012 IPR036085 GO:0005515
Mupr7497g00001 1058 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 395 550 IPR001650 -
Mupr7497g00001 1058 Gene3D Dicer dimerisation domain 574 671 IPR038248 -
Mupr7497g00001 1058 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 45 229 IPR014001 -
Mupr7497g00001 1058 CDD DEXHc_dicer 38 243 - -
Mupr7497g00001 1058 MobiDBLite consensus disorder prediction 1 31 - -
Mupr7497g00001 1058 Gene3D paz domain 885 1011 - -
Mupr7497g00001 1058 SMART ultradead3 34 242 IPR014001 -
Mupr7497g00001 1058 MobiDBLite consensus disorder prediction 9 24 - -
Mupr7497g00001 1058 FunFam Dicer-like 104 890 1010 - -
Mupr7497g00001 1058 CDD SF2_C_dicer 391 522 - -
Mupr7497g00001 1058 Pfam Type III restriction enzyme, res subunit 42 211 IPR006935 GO:0003677|GO:0005524|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7497g00001 Mupr-Chr7497 105 11905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7497g00001 439 512 Eukaryotic Initiation Factors Gene Family AT3G19760 37.333 3.72e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7497g00001 K11592 - gmx:100806831 1779.22