Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7495g00005 ATGGGTCCCACTCTCTCTTCCCAAAATCTTAAATTAGAGTGGGATAGCTTGATTCTGATGCAAGGTCAAAGGAGGACTGTTGGATCGTTCCCAGCAATTGTTAGTATGATGCAAGGGCCCAGTTCTAGTGGCACTGATATGAATCATCAGTCTTCCTTGAATCATGTGCAAAATGCAGTGGATTTCCGGTTGTCAGATTATAGGGGATCTTCTGGTGAGGCAGCATGTTTACGTGGTTCTGGTCATAATGTTCAAAGCTTCAGTGGCTGGAATACTGGTGAATCTAGTTCTAGACTGAATCTGATCAACCAAGTCAATGATGAAGGTCTAAAATCAGACCATGGGCTGTCTTCTTCATGTAATGCTACTACCGAGGATGGTCTCAGGTCTGAGGAAAGACAATTTGAACCAAATGATGTGATTTTTCCTGTTAGTTCAAATGCTAATCTACATGGCAATCAATCTAGAGTTCACCCTTCCTTTTTGCAAGGTTCCAGTTCTAATCATATTACCCAGAATATTAGTCTAGATATGGGGCACATTGCTAGTGCTGCTGATCGGGGGAAGGGAAAAGAAGCTGGTAGTAGTGTTAATGACAACAATACTAGTGGGTTAGATAGAGAAAAGACATTGTTTGGCAGTGCTTCATGTAATCACGTAGGAGCTTCATCTGAAAGCTCTGGATACATGGCTTGGGGTGATAGTACTAGTTCAAGCTCTTCTTTAGTTAATTGGGGTCCTTCCTGCAAGAGAAAGGCTCTTGAAGGTAGTTCTAGGCAATTGTGCACTGGAGGAAGCTCAAGCACTCTTGTACAATCTGAAAATGGTTGCTGGCCTACTGATCCTGTTGATCTTAATGCTTCTAGCAACTTAAGTGATTCTACACCTTTAGATGATATTCCTGTTACTAGTCCTTCGTTAATGCAGAACGCAAGAAATGAAATGAGACAAGAAGCTTCCAATGCATTTCCTTTGGTAAGTATTGCAGAAAATGTGGAAAGGCCTCTTAGAAACTTCGATAGAAGAATGAGCCAACTACAGCATCAGGAATCTATACCTCCCAATTTACCATCCACAGGGAGTGCTAGGCATCATAATAATTCTTCTTTGCATCAAATACCTGGCTCTCACTCAATCAATGATTCATTGGAATTGAGGTTAACAGCTGGAGTAACAACTGCTAATTCTGGTGCTGCTCTGAACCAGTCACCTGCCCTGCGCATCCATTCTTTTCCTTGGAACAGAACTGCCAATCCTAGAGGGTCCAGATCTTCAACTTCTTATAACTCTGGAGAAAGAGCTGTCCGAGAAGATTTTAATTTGAGAATGTTTCCAAGAGATAGTACTGAGCACCCCATGAATGTGCCTGCATCTTCTGGACATGAACCTGCAGGTTGGCATACACCATCTGGTAATGTGAACAATTCTGGAGGTGTACCTCCTTCATCCTGGATTGGATCTAGTTCAAATGTCCACTCAGTACCTAACCCTAGCTGGATTTTTAATCATGAAGTCCCCGCAGAAAATCTGCAGAGTGTGTCAGAGTTCAGTCCTTGGTCCCTTTTTCCATCAATTAGCTCTGCATCTGGTGTTCATAATGGCCATTCTACCCCATCTCCTTCTGGTCCTCCTTCATTTTCCCAGGGTTCTAGCAGCAATCAACCATATCTAAGAACTGCATTGTTGATGGAAAGAAGGGGTGGTGATCTTCTTCCTGGTCCCCATTCACTAAGAGCATTAACCTTTGACAATGAGGGGAGACGCCGACTAATATCTGAGATTCGCCAAGTCTTGATGGCAATGCGGAGGGGTGAGAACTTACGAGCTGAGGATTACATGCTCTTTGACCCTTTCCTATATCATGGCATGGCTGAAATGCATGACAGGCACAGAGAAATGCGCCTTGATGTTGACAACATGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGTATAGGAGATGTGAGCACTGGATTGAGTGAAGATGTTATTACGAAGTTGATGAAACAGCAAATTTACGTGCCTTTCATGACAGAGTCTTCTACAGATCTGGAACCTTGCTGTATCTGTCAGGAGGAATTTGCTGATGGAGAGAATGTTGGATCACTGGATTGTGGGCATGAGTTCCACAGTGCTTGCATCAAGCAGTGGCTAATGCAGAAGAACCTGTGTCCCATTTGCAAAACAACAGCCTTAGCTACATGA 2205 0.4331 MGPTLSSQNLKLEWDSLILMQGQRRTVGSFPAIVSMMQGPSSSGTDMNHQSSLNHVQNAVDFRLSDYRGSSGEAACLRGSGHNVQSFSGWNTGESSSRLNLINQVNDEGLKSDHGLSSSCNATTEDGLRSEERQFEPNDVIFPVSSNANLHGNQSRVHPSFLQGSSSNHITQNISLDMGHIASAADRGKGKEAGSSVNDNNTSGLDREKTLFGSASCNHVGASSESSGYMAWGDSTSSSSSLVNWGPSCKRKALEGSSRQLCTGGSSSTLVQSENGCWPTDPVDLNASSNLSDSTPLDDIPVTSPSLMQNARNEMRQEASNAFPLVSIAENVERPLRNFDRRMSQLQHQESIPPNLPSTGSARHHNNSSLHQIPGSHSINDSLELRLTAGVTTANSGAALNQSPALRIHSFPWNRTANPRGSRSSTSYNSGERAVREDFNLRMFPRDSTEHPMNVPASSGHEPAGWHTPSGNVNNSGGVPPSSWIGSSSNVHSVPNPSWIFNHEVPAENLQSVSEFSPWSLFPSISSASGVHNGHSTPSPSGPPSFSQGSSSNQPYLRTALLMERRGGDLLPGPHSLRALTFDNEGRRRLISEIRQVLMAMRRGENLRAEDYMLFDPFLYHGMAEMHDRHREMRLDVDNMSYEELLALEERIGDVSTGLSEDVITKLMKQQIYVPFMTESSTDLEPCCICQEEFADGENVGSLDCGHEFHSACIKQWLMQKNLCPICKTTALAT 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7495g00005 734 ProSiteProfiles Zinc finger RING-type profile. 687 728 IPR001841 -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 529 553 - -
Mupr7495g00005 734 Pfam Ring finger domain 687 728 IPR001841 -
Mupr7495g00005 734 SUPERFAMILY RING/U-box 686 731 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 185 204 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 451 488 - -
Mupr7495g00005 734 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 245 732 IPR045191 GO:0061630
Mupr7495g00005 734 SMART ring_2 687 727 IPR001841 -
Mupr7495g00005 734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 649 732 IPR013083 -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 345 376 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 411 431 - -
Mupr7495g00005 734 FunFam E3 ubiquitin-protein ligase MBR2 654 732 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 110 125 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 468 488 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 110 130 - -
Mupr7495g00005 734 MobiDBLite consensus disorder prediction 344 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7495g00005 Mupr-Chr7495 40810 47741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7495g00005 37 734 C3H Transcription Factor Family AT2G15530 38.430 2.48e-121 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7495g00005 - K19041 gmx:100809024 1319.68