Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr748g00001 ATGGGTAGATCACCTTGTTGTGACAAGAATGGCCTCAAGAAAGGACCGTGGACGCCAGAGGAAGACCAGAAACTCATCGATTACATTCAGAAACATGGGTTTGGCAATTGGAGATTACTCCCAAAGAATGCTGGGTTGCAAAGGTGTGGAAAGAGTTGCCGACTCCGTTGGACAAACTATCTCCGACCAGATATAAAGCGAGGTCGATTCTCTTTTGAAGAGGAGGAGACTATAATACAACTACATAGCATTCTTGGCAACAAGTGGTCAGCTATTGCTTCTCGCATACCCGGAAGAACAGACAATGAAATCAAGAATTACTGGAATACCCACATTAGAAAAAGGCTCCTAAGGATGGGAATTGACCCTGTGACACATAGGCCAAGGCTTGATCTTTTGGACCTCTCTTCCATCCTAAGTTCATCCCTTTGTGGTTCAACCCAAATGAACAACATCCAAAGACTGCTTGGCACGCACACAGTGTTCAATCCTGAGCTTCTAAAGTTGGCTTCATCACTCTTCTTTCAGCAACGTGAAAACCTAAACATGTGTGCCCAAAATAGTGAACAGAACCACCTATGTGATTCTCATGTTCAGAACCAAATCCCACACTTGGTACAGAGTCAGGACTTGCCTCAAGAAGCATGTACAACAGCTTGCAATACAATGAACCCCCCTTGTGCTTCATTATCATCATTGCCTTTCACTCAACCACAATTGGTTGAATCCAATATGAACCCATACCCATCAACTTTCCATGACTCTGGCTTCCAACAACATTCTCAGCTAAGTGATTCATGGCATTGCAACGGAATTGATACAAGTTATGTTCCTCAATTACTATGCTATAATTACCAAGGCTACGATTATGGTACAAATCTTATGGACCCTCCAATGTCCGAATCCTCAACTTTCCATTCCCACAACAGCAACCAGAACTTCAGCCTCGCTTCGTCAAGTCCCACACCGTTGAATTCTAACTCAACTTATGTCAATGGAAGCAGCAGCACCACCGAGGATGAGACAGAAAGCTATGTCAGCAGCAACTTGTTGAGATTTGAGTTCTCAGAGATGTTAGGTGTGAATGAATTCATATAA 1098 0.4335 MGRSPCCDKNGLKKGPWTPEEDQKLIDYIQKHGFGNWRLLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRIPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHRPRLDLLDLSSILSSSLCGSTQMNNIQRLLGTHTVFNPELLKLASSLFFQQRENLNMCAQNSEQNHLCDSHVQNQIPHLVQSQDLPQEACTTACNTMNPPCASLSSLPFTQPQLVESNMNPYPSTFHDSGFQQHSQLSDSWHCNGIDTSYVPQLLCYNYQGYDYGTNLMDPPMSESSTFHSHNSNQNFSLASSSPTPLNSNSTYVNGSSSTTEDETESYVSSNLLRFEFSEMLGVNEFI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr748g00001 365 CDD SANT 69 112 IPR001005 -
Mupr748g00001 365 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr748g00001 365 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr748g00001 365 CDD SANT 16 61 IPR001005 -
Mupr748g00001 365 Gene3D - 69 116 - -
Mupr748g00001 365 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr748g00001 365 SMART sant 66 114 IPR001005 -
Mupr748g00001 365 SMART sant 13 63 IPR001005 -
Mupr748g00001 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mupr748g00001 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 292 - -
Mupr748g00001 365 MobiDBLite consensus disorder prediction 300 343 - -
Mupr748g00001 365 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr748g00001 365 FunFam Transcription factor MYB39 69 130 - -
Mupr748g00001 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mupr748g00001 365 FunFam MYB-related transcription factor 13 66 - -
Mupr748g00001 365 Gene3D - 13 66 - -
Mupr748g00001 365 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr748g00001 Mupr-Chr748 7369 8723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr748g00001 1 365 MYB Transcription Factor Family AT4G21440 53.403 2.14e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr748g00001 Myb_DNA-binding 1.8e-16 CL0123