Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7489g00003 ATGGAAATATCAGATTTGCAAAACAACAACAAGCAGAGCAGCAGCAACACAAACAATACAGGTGGTAGTAGTAGTGGTACTACTACTCATCCTCATCCACATCCACATCCCCATCCACATCCCCACCATCATCAACAACAACAACAATCTTCATCTTCCCATCTTGTGGTCCCTTTTGATGGCAGGCCAAATCCACCTTCCCCTTTCATCTCCTCCTCCACCTCCTCCTCCTCCAACTCCTCCTCCTCCTCTACTTCCTCCGCCTCCGCCTCTACTCACCTCATCGACGCCTCCCTAGCCATCGCCACCAGATCTGACGATTCCGCCAAGAAGACGCAACAACTCTCCGCCGCCGCCGTCACCGCCGCCCCCGCCCCCAAGCGATCCACCAAGGACAGGCACACCAAAGTCGACGGGCGCGGCCGCAGAATTCGAATGCCCGCCACCTGCGCCGCTAGGGTTTTCCAATTGACCCGAGAATTGGGCCACAAATCCGACGGGGAGACAATCGAGTGGCTCCTCCAGCAGGCGGAGCCCGCCATAATCGCGGCCACCGGAACCGGAACCATCCCGGCCAATTTCTCGACCCTGAACGTCTCCCTCCGGAGCAGCGGGTCCACTCTCTCGGCTCCTCCCTCAAAGTCAGCCCCGCACACTTTTCACGGCACACTGGCACTCTCTCACCACCCTTACGAGGAAGCGTTCCAACACACAGCGTTGCTAGGGTTCCATCCACACCACCAGCAACAACAGCAGCTTCTGTCGGCCGATCAAATCGCGGAAGCGCTTCCCAGCGGCGGCGGAGACTCCAGCGACAACTACCTGAGGAAACGGTACCGAGAAGATCTGTTCAAGGACGATAACATTAACAGCCAATCGCAGAACGAAAGCGGTGACGGGTCTTCGCCTAAAACTCCAAACCTACAGTTACCGAAGCAACAGCAACAACAACAGCAAAACGAAGTTGTTTCTGGGCTTCTTAGGCCCTCGAATTTGCTACCGGGGACAGCCATGTGGGCCGTAGCACCCGGTCCCGCCAGTGGGCCTCCAGGAAGCACAATTTGGATGCTTCCCGTAACGGCGGCTTCTTCTTCTTCTTCATCATCGGCTTCTTCGACTTCTGTTTCGGCAACTTCGGAGACCCCGATGTGGCCTTTTCCTCAGACTGGTTTCATGCCGAGGTTCAACCTTCCGGGTTCTCTTGAATTTCAAGGTGCACGTGCGGGTTCTCTACAGTTGGGCTCCATGCTAATGCCTCAGCAACCTTCTCAGCATCTTGGCCTCGCCATGTCCGACTCCAACATGGTTTGGTTTTGGTCCAAAGGGACTTAG 1332 0.5593 MEISDLQNNNKQSSSNTNNTGGSSSGTTTHPHPHPHPHPHPHHHQQQQQSSSSHLVVPFDGRPNPPSPFISSSTSSSSNSSSSSTSSASASTHLIDASLAIATRSDDSAKKTQQLSAAAVTAAPAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGTLALSHHPYEEAFQHTALLGFHPHHQQQQQLLSADQIAEALPSGGGDSSDNYLRKRYREDLFKDDNINSQSQNESGDGSSPKTPNLQLPKQQQQQQQNEVVSGLLRPSNLLPGTAMWAVAPGPASGPPGSTIWMLPVTAASSSSSSSASSTSVSATSETPMWPFPQTGFMPRFNLPGSLEFQGARAGSLQLGSMLMPQQPSQHLGLAMSDSNMVWFWSKGT 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 202 216 - -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 1 31 - -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 202 221 - -
Mupr7489g00003 443 Pfam TCP family transcription factor 129 265 IPR017887 -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 66 88 - -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 110 138 - -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 282 322 - -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 288 322 - -
Mupr7489g00003 443 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 65 431 IPR005333 GO:0003700
Mupr7489g00003 443 ProSiteProfiles TCP domain profile. 130 184 IPR017887 -
Mupr7489g00003 443 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7489g00003 Mupr-Chr7489 5806 7600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7489g00003 127 434 TCP Transcription Factor Family AT1G35560 48.544 6.02e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr7489g00003 TCP 3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7489g00003 - - ccaj:109804339 523.472