Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7480g00001 ATGAGAAGGAGGAGAGATATGGACGCTGCAGGTGGAGACGCGCTTCGCCATAACCAAGGTGTGACAGATGATTTGTATACTGAACTGTGGCGTGCATGTGCTGGGACATCCGTTTATGTTCCTCGCGTTGGGGAGAAGGTTTTCTACTTCCCTCAAGGTCACTTGGAGCAGGTTGCAGCATTTACTCAGCATCAGCAAGATGGTCACATGGAAATTCCTGTGTATGATTTGCCTTCTAAGATCTTATGCAGAGTTGGATGCGTTCAGTTGAAGGTACTGTCATTTTCCACTCGGGCCGAAACTTACACAGATGAGGTTTTTGCACAATTTATATTAGTTCCGGAGCCCAAGCAAGATGACCTTGGTTTAGAGGACGAAGCGAATTGTCAAATACCTTGCAAAACCACAATCCACTCCTTTACTAAGATACTCACTCCATCAGACACAAGTACACATGGTGGATTCTCTATTCCGAAGAGGCATGCTAATGAATGCTTCCGCCCTCTGGACATGACACATCAAACACCAGCACAGGAAATTGTTGCGAAGGACTTGCATGGGGTTGAGTGGCATTTTCGGCACATATATCGAGGTCAGCCAAAACGACACTTGCTAACTAGCGGCTGGAGCACATTTGTGAATTCAAAGAAACTTGTTGCTGGAGATTCATGCATTTTCGTTAGTGGGGAAAATGGAGAAGTTCGTGTTGGGATTCGTCGGGCAATGAAACATCAGAGCAATGCATCCCCATCTTCATCTCTGATATCGGGTCATAGCATGCAACTTGGAATTTTGACTAGTGCTTCCCATGCTGTTGCCACAGGATCCATTTGGAATGAGCTGTCTATTATCCACATCTTTTGCAGGACGAATCCCTTTGAATTTATTATTCCTCTGCAAAACTATTTGAACTCAACTGTACCTGACTATTCAACTGGAACGAGAGTGCAAAAGAAGTATGAGGTTGAAGAGTCTGTAAGAAGATATCCAGGTACGATAGTTGGTAAGGAAGATATCGATAACATTAGGTGGCCTGGTTCTGAATGGAGATGTCTCAAGGTGCAATGGGATAACGTACTAGATGCCTCCATGCATCCTGAAAGGGTTTGTCCTTGGTGGATTGAGCCCTTGGAATCTGCCAAGGAGAGGGACGATACTGTTCTCCCCAGCCCAAAAAAGGCATATGTACTTAACCAGCGCCCTTTGCCTGGATCAAGTGGCTTTGCCATGGATGATGTTGTTCAGAATTCAGCCAAGACTGCATCTCAGACTCGGAGATTGGATAGGGACTTGCATGGTCAAGATTACAATGGCCTATGTTCACAGCTTTTGCAAAGATCACCATCAACAGATGTAATCTGCCCATCTAAGATCTCAAACCGTGGCTCAGGGTTTGGGAAGAAGAATCCAAATCAGCTTCCCTTTCTCATGCAAGACCCTCTTCATAAATGTCTTGGCAGATCAATGTCATTTACACATGAAGATTTGTCAATTTCAAGTTCAAATTTAAGCTCCATTGGTTCTGAATCCCTGGGATGGCCCTCTTCTGAATCTAGAAATGAAAATGATGTTCCTTTGGGCCACCATAGTAGATACAAACTTTTTGGGGTTAGTTTAATTGACCGCCAACCGGAGCTCCCTTCACCACAATTTGCTTTTAGCAAGACTTCAAGTCTCCTTTCTAGTCCTCCAATGTGTGTGACCTCAGGGAAAACGTGCAAGAAGTGTCGCTCTGTTAATAATAGGAGCTGCACAAAGGTGCTGAAGCTGGGAACTGCTCTTGGAAGAGCAGTTGACCTCGCACGTTTTCCTGGATATGATGAACTCATTGCTGAACTTGACTCGATGTTTGATTTCGGAGGAAGTTTAACCAATGGAAGCAGTGGATGGCATGGATTTCCAGTGTATGGTGCAAAAGATGATCATATGTCCAAAGGACGAAAACGAGAAGAGACGACAACGTCCATGATGACAACCTTGAAACTAAATCTGGGTCAGCACATGATTGTGTCTCCCTGTGTCACTCGCACAATCGCATTCGCACAATCCTCCATCACCGTAACTCTGACTCCCCAACATGCTTCTTCTTCTTCTTCACAAATTCTACGTCATACTAGTACCCATTCGCCCACACGGATCAGGTCCCAGTCTCACCCATTCCCAGAATCCAATGACCAAGTTGAAGACCTTAGGGTCCCTGACCATTGGTTAGACCCAACCATGGCCTTGCAGGAATCAGAGTGGCTTAGGGTTACTTTACTTAAATGGTTGGATGATGAGTACTGTCCAGAAGAAACTAACGTGGAAATAAGCAGAGTTGCGGCCAATTCGTACTACAATTCTTTGCTACAGAATCAAACAGAATTGGGTGGGATTCTGTTGAAGATGGCCCGTGAACTGGAGTCTATTAATTACAAAGAGAGTTTTCATGGGGCATTCTCATCAGCAAATGCTGCTATTGACCTCATTGCCCAACGGATAGAACACTACTGCCAGTCAATTTGA 2505 0.4483 MRRRRDMDAAGGDALRHNQGVTDDLYTELWRACAGTSVYVPRVGEKVFYFPQGHLEQVAAFTQHQQDGHMEIPVYDLPSKILCRVGCVQLKVLSFSTRAETYTDEVFAQFILVPEPKQDDLGLEDEANCQIPCKTTIHSFTKILTPSDTSTHGGFSIPKRHANECFRPLDMTHQTPAQEIVAKDLHGVEWHFRHIYRGQPKRHLLTSGWSTFVNSKKLVAGDSCIFVSGENGEVRVGIRRAMKHQSNASPSSSLISGHSMQLGILTSASHAVATGSIWNELSIIHIFCRTNPFEFIIPLQNYLNSTVPDYSTGTRVQKKYEVEESVRRYPGTIVGKEDIDNIRWPGSEWRCLKVQWDNVLDASMHPERVCPWWIEPLESAKERDDTVLPSPKKAYVLNQRPLPGSSGFAMDDVVQNSAKTASQTRRLDRDLHGQDYNGLCSQLLQRSPSTDVICPSKISNRGSGFGKKNPNQLPFLMQDPLHKCLGRSMSFTHEDLSISSSNLSSIGSESLGWPSSESRNENDVPLGHHSRYKLFGVSLIDRQPELPSPQFAFSKTSSLLSSPPMCVTSGKTCKKCRSVNNRSCTKVLKLGTALGRAVDLARFPGYDELIAELDSMFDFGGSLTNGSSGWHGFPVYGAKDDHMSKGRKREETTTSMMTTLKLNLGQHMIVSPCVTRTIAFAQSSITVTLTPQHASSSSSQILRHTSTHSPTRIRSQSHPFPESNDQVEDLRVPDHWLDPTMALQESEWLRVTLLKWLDDEYCPEETNVEISRVAANSYYNSLLQNQTELGGILLKMARELESINYKESFHGAFSSANAAIDLIAQRIEHYCQSI 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7480g00001 834 Gene3D - 137 242 IPR015300 -
Mupr7480g00001 834 ProSiteProfiles B3 DNA-binding domain profile. 140 242 IPR003340 GO:0003677
Mupr7480g00001 834 CDD B3_DNA 138 240 IPR003340 GO:0003677
Mupr7480g00001 834 MobiDBLite consensus disorder prediction 696 726 - -
Mupr7480g00001 834 SMART B3_2 140 242 IPR003340 GO:0003677
Mupr7480g00001 834 Gene3D - 578 662 - -
Mupr7480g00001 834 MobiDBLite consensus disorder prediction 696 723 - -
Mupr7480g00001 834 Gene3D - 309 383 - -
Mupr7480g00001 834 FunFam Auxin response factor 309 381 - -
Mupr7480g00001 834 Pfam Auxin response factor 287 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr7480g00001 834 Pfam B3 DNA binding domain 140 241 IPR003340 GO:0003677
Mupr7480g00001 834 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 657 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr7480g00001 834 FunFam Auxin response factor 138 242 - -
Mupr7480g00001 834 SUPERFAMILY DNA-binding pseudobarrel domain 131 270 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7480g00001 Mupr-Chr7480 1878 14116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7480g00001 575 643 B3 DNA Binding Superfamily AT5G62000 44.928 2.76e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr7480g00001 B3 7e-24 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7480g00001 - - gmx:100802387 880.552