Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7474g00001 ATGGGGAGAAGTCCTTGTTGCTCAAAGGAAGGCTTGAATAGAGGTGCTTGGACAGCTCAGGAAGACAAAGTACTCACCGACTACGTCACACTCCATGGTGAAGGAAGATGGAGAAGCCTTCCCCAAAAAGCAGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTTCGTTGGTTGAATTATCTGAGACCAGATATTAAGAGAGGCAATATATCCTCAGACGAGGAAGAGCTCATCGTGAGGCTCCACAAGCTCCTGGGAAACAGATGGTCATTAATAGCGGGGAGACTTCCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAATTTAGGCAAAAGGGTTAAAGATGGAGACCAAACCATAACCACTTGTTCTCGTAGGCTCTCATCTCAACTACCCAATGAAAACAAGACACAGAATCCAATGCCTCACTTAGGCACTCCTAAACTAGATTCCCACGTGGTCCGTACAAAGGCCACGAAATGCTCTAAGGTATTAATCTTAAACCCACTTCCTCAACCATCAATGCAATTGCCGAACAAGTCCAACGGAGAAGTAGAAGAAGAAGAAGAAGCAACGCTTGTGGATGACCTAAATAACCAAATGAAACACGGTGCATACGACAATGATATACTGCCATTTTGTGGTGAAGAAAAAGAAGTCTCAAATGATTTGCTCGTAGATTTCAACGTGGGGGATATTTGCTTATCTGATCTTCTCAACTCAGATTTGTCAGATCCGTGTAATTTGAACTGCAATGAACCCATCATGTTCTCTGATGAACTTCTCAAGGAGTGGACACAAAGCGACTTCGAAGACTCGTCTAACAACCTTTACTCTTTCATTTCCTTTCTTGAGTCCGACCACGAGAATCATAATGGCAGCAAATGA 897 0.4303 MGRSPCCSKEGLNRGAWTAQEDKVLTDYVTLHGEGRWRSLPQKAGLKRCGKSCRLRWLNYLRPDIKRGNISSDEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKRVKDGDQTITTCSRRLSSQLPNENKTQNPMPHLGTPKLDSHVVRTKATKCSKVLILNPLPQPSMQLPNKSNGEVEEEEEATLVDDLNNQMKHGAYDNDILPFCGEEKEVSNDLLVDFNVGDICLSDLLNSDLSDPCNLNCNEPIMFSDELLKEWTQSDFEDSSNNLYSFISFLESDHENHNGSK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7474g00001 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr7474g00001 298 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr7474g00001 298 CDD SANT 16 61 IPR001005 -
Mupr7474g00001 298 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr7474g00001 298 FunFam MYB-related transcription factor 13 66 - -
Mupr7474g00001 298 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mupr7474g00001 298 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr7474g00001 298 Gene3D - 70 142 - -
Mupr7474g00001 298 Gene3D - 14 66 - -
Mupr7474g00001 298 SMART sant 66 114 IPR001005 -
Mupr7474g00001 298 SMART sant 13 63 IPR001005 -
Mupr7474g00001 298 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 179 - -
Mupr7474g00001 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr7474g00001 298 CDD SANT 71 112 IPR001005 -
Mupr7474g00001 298 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7474g00001 Mupr-Chr7474 473 1951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7474g00001 1 116 MYB Transcription Factor Family AT5G49330 73.276 2.63e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr7474g00001 Myb_DNA-binding 4.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7474g00001 K09422 - gmx:100802704 396.356