Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7459g00004 ATGTATTTAATCTCCGCAAAGCAATTTCCCTGTTCGATTGAATTGAAAAGACGCATGCGAAGCTGTGAAACCCCTGTGCTGAAACAAACACAGTATCACACCATCATGGAACGCAACAACAACAACAACAGGGGGCTAAGAATCCACGCATTCTCGTCACGGCCACCACCTTCCCCTCCCATGCTTTCCTTCGTTGCAGCTCTCGCCACCGCCACGCTAATCTTCTTGTGCCTCTATGTTTTCTCCGCCATTGTTTCCGTTGCCATTCTTCTACTCCTTTACATCACCACCCTCTTCCTTTGCAAGTTTATGCATAGAGAAGAAACCCCCCCAAACCAAAGGGTCGTGAGAATTTTCAATAAGCTTTTCTGGGTTGTTGACGAAAATAGGGGAAGCCACAGGGAACAAGTTACGAAGCTGCTAGGATGTGTTGCGTGCTTTGGAAGTCGAGCATTGACATCATCAGTGAGTGAATGTGTAATTTGCTTGGAGGATTTCAAGAAGGGAGAAGAATGCCTTGTTTTCTCAGTTTGTGGCCACACTTTCCATTGTGATTGTATCAACCATTGGCTACAAGAAAAACCCACTTGCCCCATTTGTCGTCATTGTGTGCCTTCACCAGCCATACCATGA 633 0.4613 MYLISAKQFPCSIELKRRMRSCETPVLKQTQYHTIMERNNNNNRGLRIHAFSSRPPPSPPMLSFVAALATATLIFLCLYVFSAIVSVAILLLLYITTLFLCKFMHREETPPNQRVVRIFNKLFWVVDENRGSHREQVTKLLGCVACFGSRALTSSVSECVICLEDFKKGEECLVFSVCGHTFHCDCINHWLQEKPTCPICRHCVPSPAIP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7459g00004 210 CDD RING-H2_PA-TM-RING 158 201 - -
Mupr7459g00004 210 ProSiteProfiles Zinc finger RING-type profile. 159 201 IPR001841 -
Mupr7459g00004 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 207 IPR013083 -
Mupr7459g00004 210 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 41 205 - -
Mupr7459g00004 210 Pfam Ring finger domain 158 201 IPR001841 -
Mupr7459g00004 210 SUPERFAMILY RING/U-box 158 206 - -
Mupr7459g00004 210 SMART ring_2 159 200 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7459g00004 56 202 C3H Transcription Factor Family AT2G17450 29.730 9.30e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7459g00004 - - vra:111240582 195.667