Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7455g00001 ATCCCGCCAAACGACAAGGTCCGAAAGCGCGACCCGAGGCTCACCTGCTCCAACTTCCTCGCTGGTCGAGTCCCCTGCGCCTGCCCCGAACTCGACGCCAAACTCGAGGACCGCGGTTTGCCCGGCAAAAAACGCGCCCGCACCGCGCGTGCATCTGCTTCCGCCCGCTGCCAGGTCCCCGGCTGCGAGGTTGACATCTCCGAGCTCAAGGGCTACCACCGCCGCCACAGAGTCTGCTTGCGCTGCGCTAACGCCGCCACCGTCGTCCTCCACGGCGAGGCCAAGCGATACTGCCAACAGTGCGGAAAGTTTCACCTTTTGCCGGATTTCGACGAAGGTAAACGTAGCTGCAGAAGGAAATTAGAGCGCCATAACACCAGAAGGCGAAGAAAGCCACCAACGGATTCCGGAGGTGCTGGTCATAGCGAAGTTGAACCTGTTACTCAAAACGAGGAAAACAGTTATGATGCGGAAGCAGGGAAAGATTGTTCAATTTTGAGTACTGAGATCAACGACAAAGGAGTGTCCCTGGATCGTGAAGATGAACCGGTTCCCATTCCGAGCTCGGCTCCTGATTCCCAGAATATTAATAGTGATAGTGGTGTGTCTTTGGCTGTTTCTGGCGAGACGGCGCGGGTGAATAGTGGGAAAGATGTTTCCAACACTTCTAATTCGCCTTCGTATTGTGACAATAAGAGTGCCTATTCGTCTATGGTCGGATTTCGTTTAAGCTTTATGACTGGAATCCTGCGGAATTTCCCAGAAGGCTACGACACCAAGCAGCCAAATGCATTTTCAGATATTCCAATGGTTGGCAAGTATGCCTTTAGAGTTGGAGGGATATATCCGCCCTGGTTACTGAAAGACTCTTTGGAATATGTGCGTGATATTGTTGCTCCTGGAAAGATTCTATCTGGAAGAGGCACCACACTAGTTCATCTGAATGACATGATCTTCCGTGTTATGAAAGATGGAACTTCTGTGACGAAAGTTGAGGCAAACATGCAGGCACCAAGGCTTCACTATGTTCATCCCACATACTTTGAGGCCGGCAAACCTATGGAGTTTGTTGCTTGTGGAAGTAACTTATTGCAGCCTAAGTTTCGGCTTCTCGTATCGTTTTCTGGAAAGTATCTGAAATGTGAGTATTGTGTACCATCTCCACATAACTTGACTGAAGACAATATTTCTTGTGCTTTTGACAATCAGTTATACAAGATCTATGTCCCTCGTACAGAGGAAAGTCTCTTTGGGCCTGCATTTATTGAGGTGGAGAATGAATCTGGTTTATCAAACTTTATTCCTGTACTCATTGGGGATAAAGAAATTTGTACTGAAATGAAGACACTGCAGCAAAAATTAGATGTATCTCTCCTTTCTAAACAATTCCGATCTGCATCTGGTGGTTCTGTCTGCAGCTCATGTGAAACTTTTGCACTTAGTCACGCATCATCATCAGATTTACTTTTAGATATAGCATGGTTGCTTAAGGACACTACTTCAGAAAATTTTGACAGAGTGATGACAGCATCACAAATTCAACGATATTGTCATTTGTTGGATTTTCTGATATGCAATGATTCAACAATCATTTTGGGAAAAATATTACCAAATTTGATAATCTTGACTGAAAGCATGAAATCCGATGTTGTGATTACTAGGACAAGTGATGTTGACATGACACGACTCCTAAATCACATACATGATGCTAGAAATGCCATATATCAGAAACATCAGAAAGGTGGAGGTATAATTGTGCACTCTGAAATGGAAGGCTTTAAACCTGCTCAAGACTGCACCCAAGATAACAAGCTATCAGTTAGAGTTAACAGTCAGGGTATCCTGTCGAGAGCAGATGCAAAGTGGGGAGTACTGAAAAGTCCAATATGTAATGACAAAAATGAAAGAATACCACTTTTGAAGAGGGATATTATAATGAATATGGAAGAGTTTCCTGAAAGATATGGCCGTCAATGTTTGGGCAGGGGATTCTTGACCTCTCGACCAGCTATTTTTGTGATGGTTTCTGTTGCTGTTTGTCTTGGTGTATGTGTAGCCGTCCTTCATCCTGGGAGGGTTAGTGAGTTAGCAGTATCCGTTAGAAGGCGAGTGTCCGAGTTTGATAAATCAGGTTAA 2136 0.4513 IPPNDKVRKRDPRLTCSNFLAGRVPCACPELDAKLEDRGLPGKKRARTARASASARCQVPGCEVDISELKGYHRRHRVCLRCANAATVVLHGEAKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNTRRRRKPPTDSGGAGHSEVEPVTQNEENSYDAEAGKDCSILSTEINDKGVSLDREDEPVPIPSSAPDSQNINSDSGVSLAVSGETARVNSGKDVSNTSNSPSYCDNKSAYSSMVGFRLSFMTGILRNFPEGYDTKQPNAFSDIPMVGKYAFRVGGIYPPWLLKDSLEYVRDIVAPGKILSGRGTTLVHLNDMIFRVMKDGTSVTKVEANMQAPRLHYVHPTYFEAGKPMEFVACGSNLLQPKFRLLVSFSGKYLKCEYCVPSPHNLTEDNISCAFDNQLYKIYVPRTEESLFGPAFIEVENESGLSNFIPVLIGDKEICTEMKTLQQKLDVSLLSKQFRSASGGSVCSSCETFALSHASSSDLLLDIAWLLKDTTSENFDRVMTASQIQRYCHLLDFLICNDSTIILGKILPNLIILTESMKSDVVITRTSDVDMTRLLNHIHDARNAIYQKHQKGGGIIVHSEMEGFKPAQDCTQDNKLSVRVNSQGILSRADAKWGVLKSPICNDKNERIPLLKRDIIMNMEEFPERYGRQCLGRGFLTSRPAIFVMVSVAVCLGVCVAVLHPGRVSELAVSVRRRVSEFDKSG 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7455g00001 711 SUPERFAMILY SBT domain 55 133 IPR036893 GO:0003677|GO:0005634
Mupr7455g00001 711 ProSiteProfiles Zinc finger SBP-type profile. 54 131 IPR004333 GO:0003677
Mupr7455g00001 711 MobiDBLite consensus disorder prediction 208 227 - -
Mupr7455g00001 711 Gene3D - 52 118 IPR036893 GO:0003677|GO:0005634
Mupr7455g00001 711 MobiDBLite consensus disorder prediction 174 201 - -
Mupr7455g00001 711 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 525 IPR044817 GO:0003677
Mupr7455g00001 711 MobiDBLite consensus disorder prediction 121 158 - -
Mupr7455g00001 711 Pfam SBP domain 57 131 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7455g00001 Mupr-Chr7455 58 8639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7455g00001 4 704 SBP-box Gene Family AT5G18830 43.466 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr7455g00001 SBP 2.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7455g00001 - - gmx:100776034 1108.59