Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7454g00001 ATGGCAGAGAAAGCTAAGATGGGTGAGAAGGAATGGTACTTCTTTAGCCTTCGTGATAGAAAGTACCCAACTGGGTTACGCACCAACAGGGCCACTGAGGCTGGTTATTGGAAAGCCACAGGGAAAGATCGAGAGATTTATAGCTCAAAAACTTGTTCCCTCGTTGGCATGAAGAAAACCTTGGTTTTCTATAGAGGAAGGGCTCCAAAGGGTGAAAAGAGCAACTGGGTCATGCATGAGTATCGCTTAGAAGGCAAATTCGCTTACCACTACCTCTCTAGAAGCTCTAAGGATGAGTGGGTGATATCACGCGTGTTTCAGAAGAACACCACCGGCGGTGGCTCCACCGTGTCTGCCACCGCCACCGGTGGTGGCGGTTCGAAGAAAACAAGAACGAGCACATCAAACGTTAGTAGCAACATGAGTCTCTGTGCCGAACCGGGTTCACCCTCTTCCATTTACCTTCCGCCGCTTCTAGAATCTTCTCCCTACGCCGCCACCAGCAGCGCCGCCGCGTTCAACGACCGAGAAAGCTGCTCCTTCGACAGCGCCGCCAACCAGAGGGCGCACGTGTCCTGTTTCTCCACCATGTCCGCCAATGCTGCCGCCTTTGACCACCTCGTTCCGCCGCCGGAGCCGCCGCTCGACGCTTTCTCTCGGTTTCACCGAAACGGCGTCGGCGTCGGCGTCGCTTCCTTCCCCAGCCTGAGGTCCTTGCACGACAACCTTCAGCTGCCGTTCTTTTTCCCTCCGGTGGGTCATGGCGCTGATGTGGCGGGGTTCGGTGCCGTCGGGAACTGGCCGGCGCCGGAGGATCCGAGGGTTGTCGACGGTGGCTCCGGCATGACGATTGTACCGTCTGAGCTTGATTGC 873 0.5647 MAEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKNTTGGGSTVSATATGGGGSKKTRTSTSNVSSNMSLCAEPGSPSSIYLPPLLESSPYAATSSAAAFNDRESCSFDSAANQRAHVSCFSTMSANAAAFDHLVPPPEPPLDAFSRFHRNGVGVGVASFPSLRSLHDNLQLPFFFPPVGHGADVAGFGAVGNWPAPEDPRVVDGGSGMTIVPSELDC 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7454g00001 291 SUPERFAMILY NAC domain 3 108 IPR036093 GO:0003677|GO:0006355
Mupr7454g00001 291 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 175 - -
Mupr7454g00001 291 Gene3D NAC domain 1 112 IPR036093 GO:0003677|GO:0006355
Mupr7454g00001 291 ProSiteProfiles NAC domain profile. 1 108 IPR003441 GO:0003677|GO:0006355
Mupr7454g00001 291 MobiDBLite consensus disorder prediction 113 141 - -
Mupr7454g00001 291 Pfam No apical meristem (NAM) protein 3 83 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7454g00001 Mupr-Chr7454 4225 5829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7454g00001 4 248 NAC Transcription Factor Family AT5G53950 52.632 1.95e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr7454g00001 NAM 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7454g00001 - - gmx:100788671 471.085