Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7427g00007 ATGGGAGTTGGTGGTAATTTCTGGGACCTGCTGAAGCCCTATGCGCGCAACGAAGGTTTTGATTTCTTGAGGAACAAGCGAGTTGCTGTGGACCTTTCCTTCTGGATTGTTCAGCACGAGAATGCTATTAAGACCCATCATGTCAGAAAACCCCACCTCAGGCTTACCTTCTTCCGCACCATCAATCTCTTCTCCAAGTTTGGAGCACTTCCGGTGTTCATTGTTGATGGGACTCCGTCACCACTGAAATCACAAGCCAGGATTGCAAGATATTTCCGGTCTTCTGGCATTGAATTGACTAGCTTGCCAGTGCCCGAAGAAGGTGTTTCAGCTGAGAGGAGTAGTTTGTTTTCAAGCCGTGTTCAAGAATGTGTGGAACTGGTTGAACTACTTGGAATGCCTGTACTAAAGGCTAAAGGGGAGGCTGAAGCACTCTGTGCTCAATTAAATAGTGAAGGTCATGTAGATGCTTGCATCACAGCTGACAGTGATGCATTTCTCTTTGGGGCCAAATGCATTATAAAATGTTTCTGTCCCAATTCAAAAGAACCTTTTGAATGCTACAATCTGTCAGATATTGAAGCTGGGCTTGGATTGAAGAGGAAACACTTCATAGCTATGTCTCTTTTGGTTGGAAATGATCATGATATGAATGGTGTTCGAGGGATTGGGCTTGACACTGCACTTCATTTTGTTAAAGCTTTTAGTGAAGATGATATATTGAATAGATTACATGAGATAGGCAAAAGGAATACTTCACAGATTCCCATCTGCAATAAATTTGAGGACAATATGGATATGGATGGGAACTCTCCAAATAGAAAACAACCTCATTGCTCATTTTGTGGGCATCCAGGCACCAAAAAAGATCATATGAAATTTTCCTGTGAATATTGTGTCAGAAAGGACGATGAAGGTTGCCAAAGAAAACCAGAGGGTTTTAAATGTGATTGCATCTCCTGTGACACGTGTAGGAGACATAAGGAGCAAAAAAGACTGGAAAATTGGCATACAAAAATTTGTCACAAGATTGCAGAGGAGCCAAACTTTCCCAAGGATGAAATTATTGATATGTATTTATGCAATGACAATGGTTACTTTTCTGCAAGTGATGGCCCTCACATTATACAGAGAAAACCCAATATTGAGATGCTGATTGACTTTTTAAACTTCCATCAACATTGGGAGCCATCCTACATTCGACAGACGATGTTTCCTATGATGTCCACCATTTTTTTGAGAGATATGGCTACAACTACAGAAGAAACTTTGTTATTTGGACAGTATGAGTTTGATTCTGTGGAACGTGTGAAGATAAGATACGGACATCAATTTTATGTGGTCAAGTGGAAACGTGCAGGGAGCAAAATTGCCTGTAAAGTTCCATCAAAGGAATCTAGCGTGCAACAAGATGCTATGGAGCTTGATGAATCGGTGGATCTACTAGATGACACTGATGTTCCCGAGATTCATGAAGATGGTGGATGTAGTTTTCTGCTTACAGATGAAAATATGGACCTTGTGGGAGCTGCTTTTCCAATAGAAGTCAAAAGGTTTTGGCAGGAGCAGGAACTGAAAAGAAGAAAGAATTCTTCAACGTCAAGGTGTGAAGAAAATGAAAAATCAGAATCACCAGACTCAAGAAGTATTCAGCTAAACATTACAGAGTTCTACCAATCAACCAAAGTTAAACATCGGCAATCAAAACAAGGACAAGAGTCATCCAAGAATACCGATATCCAAGGCAGTGGAGGCTCAAAAATGAAAAGGAGAACGTCAAGTCCTACTAAACTTTCAAAATCTGTGAGGCGTCGCCTTTTATTTGAC 1827 0.4078 MGVGGNFWDLLKPYARNEGFDFLRNKRVAVDLSFWIVQHENAIKTHHVRKPHLRLTFFRTINLFSKFGALPVFIVDGTPSPLKSQARIARYFRSSGIELTSLPVPEEGVSAERSSLFSSRVQECVELVELLGMPVLKAKGEAEALCAQLNSEGHVDACITADSDAFLFGAKCIIKCFCPNSKEPFECYNLSDIEAGLGLKRKHFIAMSLLVGNDHDMNGVRGIGLDTALHFVKAFSEDDILNRLHEIGKRNTSQIPICNKFEDNMDMDGNSPNRKQPHCSFCGHPGTKKDHMKFSCEYCVRKDDEGCQRKPEGFKCDCISCDTCRRHKEQKRLENWHTKICHKIAEEPNFPKDEIIDMYLCNDNGYFSASDGPHIIQRKPNIEMLIDFLNFHQHWEPSYIRQTMFPMMSTIFLRDMATTTEETLLFGQYEFDSVERVKIRYGHQFYVVKWKRAGSKIACKVPSKESSVQQDAMELDESVDLLDDTDVPEIHEDGGCSFLLTDENMDLVGAAFPIEVKRFWQEQELKRRKNSSTSRCEENEKSESPDSRSIQLNITEFYQSTKVKHRQSKQGQESSKNTDIQGSGGSKMKRRTSSPTKLSKSVRRRLLFD 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7427g00007 609 Gene3D - 3 198 - -
Mupr7427g00007 609 MobiDBLite consensus disorder prediction 546 561 - -
Mupr7427g00007 609 SMART xpgineu 129 199 IPR006086 GO:0004518
Mupr7427g00007 609 SMART xpgn3 1 97 IPR006085 GO:0004518
Mupr7427g00007 609 MobiDBLite consensus disorder prediction 528 609 - -
Mupr7427g00007 609 MobiDBLite consensus disorder prediction 528 545 - -
Mupr7427g00007 609 FunFam Flap endonuclease GEN-like 1 2 198 - -
Mupr7427g00007 609 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 199 415 IPR036279 -
Mupr7427g00007 609 FunFam Flap endonuclease GEN-like 1 199 257 - -
Mupr7427g00007 609 CDD PIN_GEN1 2 203 - -
Mupr7427g00007 609 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 204 219 IPR006084 -
Mupr7427g00007 609 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Mupr7427g00007 609 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 128 145 IPR006084 -
Mupr7427g00007 609 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 149 169 IPR006084 -
Mupr7427g00007 609 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Mupr7427g00007 609 Pfam XPG N-terminal domain 1 93 IPR006085 GO:0004518
Mupr7427g00007 609 SUPERFAMILY PIN domain-like 6 214 IPR029060 -
Mupr7427g00007 609 MobiDBLite consensus disorder prediction 573 592 - -
Mupr7427g00007 609 Pfam XPG I-region 132 214 IPR006086 GO:0004518
Mupr7427g00007 609 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 550 IPR006084 -
Mupr7427g00007 609 Gene3D - 199 261 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7427g00007 16 256 Core DNA Replication Machinery Family AT5G26680 29.119 1.73e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7427g00007 K15338 - gmx:100779848 1064.68