Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7427g00005 ATGGCTTTGAGAGTTGTCAGATCTTCAAAATCCATTGCTGCTGTTTCAGCATTTTTTACCGTTAAGATCTTTTGCCGCCGAAAAATTGACAGCCACTCTCAACCGTCTGATCTAGAAATCCCCAACATCCGTGAGGGTCCACCTCATGCAGTGGGCCCCACCAACACCGCTTGTCACGTGTGGAGTTTATCTGGGGTGTCACCACTCTTGGCTTGTGTTGAAGAATCTGTGAAGAGGGGTACCAATTTGGTGACCACGGTCATTGGGTTTGGGATGAGTGCCACTTTCATTGTGTTTGTGTGCACCAGAATCATTTGTGGAAGGCTAAGAGGAGGTGTTGAATCTCGCATGATGTATGAGATTGAATCGAGGATTGATATAGAACAGCCAGAGCATCATGTTAATGACCCTGAATCCGAACCTGTTCTGCTTGATGCAATCCCTACTTTGAAGTTCAACCAAGAGGCTTTCAGTTCTACTGAACATACACAGTGTGTGATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTGCGCATCATGCCGAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGAAAACAATCTACCTGCCCGGTATGCCGTCTTCCATTGAAGAACTCTTCCGAAACAAAGCATGTGAGACCTGTGACATTCACCATGAGCCAAACCCTTGATGAGTCTCACACTTCAGAAAGGAATGAAGAAGATACTGAGAGACATGATGAACCTATTGGTGCTAGTAACTCTTTACAACCAACTTCAGGTGAACAAGAAGCAAGGCAATGA 804 0.444 MALRVVRSSKSIAAVSAFFTVKIFCRRKIDSHSQPSDLEIPNIREGPPHAVGPTNTACHVWSLSGVSPLLACVEESVKRGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDIEQPEHHVNDPESEPVLLDAIPTLKFNQEAFSSTEHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQTLDESHTSERNEEDTERHDEPIGASNSLQPTSGEQEARQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7427g00005 267 SUPERFAMILY RING/U-box 164 213 - -
Mupr7427g00005 267 ProSiteProfiles Zinc finger RING-type profile. 165 207 IPR001841 -
Mupr7427g00005 267 SMART ring_2 165 206 IPR001841 -
Mupr7427g00005 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 217 IPR013083 -
Mupr7427g00005 267 MobiDBLite consensus disorder prediction 225 267 - -
Mupr7427g00005 267 MobiDBLite consensus disorder prediction 233 249 - -
Mupr7427g00005 267 PANTHER OS11G0150450 PROTEIN 79 243 - -
Mupr7427g00005 267 Pfam Ring finger domain 164 207 IPR001841 -
Mupr7427g00005 267 CDD RING-H2_EL5-like 164 207 - -
Mupr7427g00005 267 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7427g00005 Mupr-Chr7427 57916 60439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7427g00005 154 210 C3H Transcription Factor Family AT4G10160 54.386 1.16e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7427g00005 - - ccaj:109802319 363.614