Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7425g00001 ATGAAGAAATGGATGGCCAACCCACTTCCATATTTTGCATCCTTTGTACCTGAGTTCAAGGTTAACACCAAAGAACTACAAATAGTGAAGATTCATAAGCTTCCAAGCATGGAGCTTCCCAATCAAGCTCAAGAAGGGTCTTCACAAAAGAAAATGGGAAGAGGGAAGATTGAAATCAAACGGATCGAGAACACCACCAATAGACAAGTCACCTTTTGCAAGCGCCGCAACGGGTTGCTGAAGAAAGCTTATGAATTATCAGTTTTGTGTGATGCTGAAGTTGCCCTTGTTGTCTTCTCAAGCCGTGGTCGTTTGTATGAGTATGCCAACAACAGTGTTAGGGCAACTATTGAAAGGTACAAAAAGGCATGTGCTGCTTCCTCAAATGCAGAATCCGTATCTGAAGCTAATACACAGTTTTACCAGCAAGAATCATCCAAATTGAGAAGACAAATTCGAGACATTCAGAATCTGAACAGGCACATCCTTGGTGAAGCACTTGGTTCTCTTAGTCTCAAGGAACTAAAGAACCTCGAGGGTAGATTGGAGAAAGGATTAAGTAGAGTTAGATCTAGAAAGCATGAAACATTGTTTGCTGATGTCGAGTTCATGCAAAAGCGGGTACTCATCAGCTCC 636 0.4198 MKKWMANPLPYFASFVPEFKVNTKELQIVKIHKLPSMELPNQAQEGSSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVRATIERYKKACAASSNAESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKRVLISS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7425g00001 212 ProSitePatterns MADS-box domain signature. 54 108 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 FunFam agamous-like MADS-box protein AGL11 64 147 - -
Mupr7425g00001 212 Coils Coil 141 161 - -
Mupr7425g00001 212 Pfam K-box region 136 207 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr7425g00001 212 PANTHER SERUM RESPONSE FACTOR HOMOLOG 52 193 - -
Mupr7425g00001 212 CDD MADS_MEF2_like 53 129 IPR033896 GO:0000977|GO:0045944
Mupr7425g00001 212 ProSiteProfiles MADS-box domain profile. 52 112 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 Gene3D - 64 132 IPR036879 GO:0003677|GO:0046983
Mupr7425g00001 212 SUPERFAMILY SRF-like 53 128 IPR036879 GO:0003677|GO:0046983
Mupr7425g00001 212 SMART madsneu2 52 111 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 61 108 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 PRINTS MADS domain signature 89 110 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 PRINTS MADS domain signature 74 89 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 PRINTS MADS domain signature 54 74 IPR002100 GO:0003677|GO:0046983
Mupr7425g00001 212 ProSiteProfiles K-box domain profile. 138 212 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7425g00001 Mupr-Chr7425 3424 9867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7425g00001 48 208 MADS-box Gene Family AT2G42830 83.230 1.30e-98 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mupr7425g00001 K-box 7.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7425g00001 K09264 - gmx:100808734 318.161