Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7415g00002 ATGGATGTTGCCGAGGTTGAAGAAAATCATTTTGCAGCTAGTGATGCCAAGTTACATGGAGAGATGTGCAAGTGTCTCTCTGCAGTATACTTCAAGATATTGTCATTATTTCCTTCTTTAGAAGCAGCCAGGCCTAGGAGCAAATCTGGAATTCAGGCATTATGTTCATTGCATGTAGCCTTAGAAAAGACAAAGAATGTTCTTCAGCATTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGAGATTCTGTTCTTCTAAAATTTGAGAAGGCTAAATTTGCTCTTGAGGATAGTCTTAAAAGGGTGGAAGATATTGTTCCTCATTCTATTGGTTGTCGGATTGATGAAATTGTGAATGAACTTTCAAGTACGGTATTTGCACTTGACCCATCAGAGAAGCAAGTAGGGGATGATTTAATTGCATTACTTCAGCAGGGAAGAAAGTTTAATGACTCTAATGACAGTAATGAACTTGAATGTTTTCATCTCGCTGCTACTAAACTTGGAATCACTTCTTCAAGAGCAGCTCTTACAGAAAGAAGAGCACTAAAGAAAGTTATAGAAAGAGCTCGGGCTGAGGACGACAAGAGGAAAGAATCAATTATTGCTTTTCTTTTACACCTTATGAGGAAATATTCCAAGTTATTTAGAAGTGAGTTCTCAGATGATAATGATTCTCAGGGTTCTCTACCTTGTTCTCCCACTGTTCAGAAATCTCTTGAGGATGGCATTCGTGGTGGTCATTGTCATGCCTTTGACAGACAGCTTTCAAAACTTAGTTCCTTTAGTTTTAAGCCAAATAATAGGAAATCAGGGCAAATGCTCCTTCCACCTGAAGAGTTAAGGTGCCCAATATCTCTGCAACTTATGAGTGATCCTGTTATAATTGCTTCTGGGCAAACATATGAAAGGGTTTGTATAGAGAAATGGTTCAGAGATGGGCACAACACTTGCCCAAAGACTCAACAGAGACTTTCACATCTTTCTTTGACTCCTAATTACTGTGTTAAGGGTCTTGTGGTTAATTGGTGTGAACAGAATGGAATTCCCATTCCTGAAGGCCCTCCTGAATCTCTTGATTTTAACTACTGGAGATTGGCATTATCAGATTCTGAATCCACAAATTCAAGATCTGTAAACAGTGTTGGCTCTTGCAAGTTGAAGGGTGTCAAAGTTGTTCCTGTAGAAGAGAGTGGTATCTCAGAGCAAATGGGGGCAAATGCAATTGAAAGTTTTTCTGCTAAAGAGGAAGATAATGAACAGTATCTTACTTTTCTTAAAGACTTGACAGAAGGGGACAATTGGAAGAGGAAGTGTAAAGTGGTAGAACAGTTGAGGCTGTTGCTGCGGGATGATGAGGAAGTCAGGATTTTTATGGGGGCTAATGGATTTGTTGAAGCACTTATTCAGTTTCTGCAATCAGCTGTGCATGAAGGGAATGTGATAGCTCTTGAAAACGGAGCTATGGCTCTGTTCAACCTGGCTGTGAATAACAACAGAAATAAGGAAATTATGATATCAGCAGGAATGTTATCGTTGTTGGAGGAAATGATTTCAAAATCTAGTTCCTATGGTTGTGTAGCCGCCCTGTATCTGAATATTTCTTGCCTTGAAGAAGCCAAGCATGTGATTGGCACCAGTCAGGCTGTCCAGTTCCTAATCAAGATTCTTCAAGCCAAGACAGAAGTCCAGTGCAAGCTAGATTCCCTCCATGCACTCTACAATCTTTCTACTGTGCCCTCCAATATTGCAAACCTCCTTTCATGTGGCATCATTAAAAGCCTACAATCCCTTCTTGTAGGCCAGGGTGATTCCATGTGGACAGAAAAATGCATAGCTGTTTTGATAAATTTGGCTACTTCTCAAGCGGGAAGAGAGGAAATAATATTGGCTCCTGGACTCATAAGCGCCTTGGCTTCCACACTGGATACTGGTGAGCTCTTAGAGCAGGAGCAAGCTGTCTCTTGTCTCCTAATTTTGTGCAACAGGAGTGAGAAATGTTGTGAGATGGTCCTGCAAGAGGGGGTTATACCTGCATTGGTAACAATATCGGTGAATGGGACCTCGAGAGGAAGAGAAAAGGCTCAGAAACTTTTGATGGTCTTCCGAGAGCAGCGACAACGAGAGCCTTCACCTTCACCTGTTAAGACAGATCAATGTGAATCTGAAAGTAGTAATTTGCGTATGCCTCCTCCTGAAACGAAACCGCTATGTAAATCAATATCTAGAAGAAAGGTGGGAAAAGTTTTAAGCTTTCTCTGGAAAAGCAAGAGCTATTCTGTTGAGATCAATTCTCGACCAATAATAATGCTGGACAGGGACATCAACTTTAAAACATAA 2346 0.4071 MDVAEVEENHFAASDAKLHGEMCKCLSAVYFKILSLFPSLEAARPRSKSGIQALCSLHVALEKTKNVLQHCSECSKLYLAITGDSVLLKFEKAKFALEDSLKRVEDIVPHSIGCRIDEIVNELSSTVFALDPSEKQVGDDLIALLQQGRKFNDSNDSNELECFHLAATKLGITSSRAALTERRALKKVIERARAEDDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSLPCSPTVQKSLEDGIRGGHCHAFDRQLSKLSSFSFKPNNRKSGQMLLPPEELRCPISLQLMSDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQRLSHLSLTPNYCVKGLVVNWCEQNGIPIPEGPPESLDFNYWRLALSDSESTNSRSVNSVGSCKLKGVKVVPVEESGISEQMGANAIESFSAKEEDNEQYLTFLKDLTEGDNWKRKCKVVEQLRLLLRDDEEVRIFMGANGFVEALIQFLQSAVHEGNVIALENGAMALFNLAVNNNRNKEIMISAGMLSLLEEMISKSSSYGCVAALYLNISCLEEAKHVIGTSQAVQFLIKILQAKTEVQCKLDSLHALYNLSTVPSNIANLLSCGIIKSLQSLLVGQGDSMWTEKCIAVLINLATSQAGREEIILAPGLISALASTLDTGELLEQEQAVSCLLILCNRSEKCCEMVLQEGVIPALVTISVNGTSRGREKAQKLLMVFREQRQREPSPSPVKTDQCESESSNLRMPPPETKPLCKSISRRKVGKVLSFLWKSKSYSVEINSRPIIMLDRDINFKT 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7415g00002 781 MobiDBLite consensus disorder prediction 714 731 - -
Mupr7415g00002 781 SUPERFAMILY RING/U-box 275 354 - -
Mupr7415g00002 781 Pfam U-box domain 280 349 IPR003613 GO:0004842|GO:0016567
Mupr7415g00002 781 CDD RING-Ubox_PUB 280 332 IPR045210 -
Mupr7415g00002 781 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 465 511 IPR000225 GO:0005515
Mupr7415g00002 781 PANTHER U BOX DOMAIN-CONTAINING 23 705 - -
Mupr7415g00002 781 FunFam RING-type E3 ubiquitin transferase 278 352 - -
Mupr7415g00002 781 Coils Coil 175 195 - -
Mupr7415g00002 781 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
Mupr7415g00002 781 SMART arm_5 454 498 IPR000225 GO:0005515
Mupr7415g00002 781 SMART arm_5 500 538 IPR000225 GO:0005515
Mupr7415g00002 781 SMART arm_5 623 664 IPR000225 GO:0005515
Mupr7415g00002 781 SMART arm_5 581 622 IPR000225 GO:0005515
Mupr7415g00002 781 SMART arm_5 539 580 IPR000225 GO:0005515
Mupr7415g00002 781 Gene3D - 403 713 IPR011989 -
Mupr7415g00002 781 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Mupr7415g00002 781 SUPERFAMILY ARM repeat 413 707 IPR016024 -
Mupr7415g00002 781 MobiDBLite consensus disorder prediction 707 738 - -
Mupr7415g00002 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 352 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7415g00002 Mupr-Chr7415 4887 9175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7415g00002 1 763 U-box Gene Family AT1G24330 66.023 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7415g00002 - - gmx:100804344 1328.92