Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr740g00003 ATGGCTTTGGAGGCTTTGAATTCTCCAACCGCATCGAGCACTCCCTTCCGCAGCTACGAAGAAGAGAAGGAGGTTGACCTTCACTTCCGCGAGCCTTGGGCTAAAGGGAAACGTTCCAAACGACCGCGTTTCGAGACTGAGGAAGAGTACCTCGCTCTTTGCCTCATCATGCTCGCACAAAGCGGCAACAACACCACTTCTCACCGCCAAACTCAACCATCATCGTCGCACTCACACTCACACTCACACAAACAAGGGTCATCCCCGGTGAAACTAACGCACACGTGTTCCATTTGCAACAAATCCTTTCCTTCATACCAAGCACTCGGTGGTCACAAGGCCAGCCACCGCAAGTCCTCTTCGGAATCCGCCTCCACCGCCGCCTCCACTGCTGCAGCCAACGACGTCGTTACCGCCTCGACCACCGGCGGCGGAAGGATGCATGAGTGTTCCATCTGTCACAAGACTTTCGCTACCGGTCAGGCCCTGGGCGGCCACAAGCGCTGCCACTACGACGGCGGCAACAACCACAGTAACGCCAACAACAGCAGCGGCGTCACTTCCTCCGACTGCGGCGGCGGTGCTTCCTCCTCCCACGCCCTCCGTGGGTTTGACCTGAACCTGCCGGCGCCTCTGACGGAGTTCTGGCCGCCGGTGGGATTCGACTTCGGGAAGAAGAAGGTTAACGGAGGCGGTGAACAAGAGGTGGAAAGCCCGTTGCCGGTAACTGCCAAGAGGCCGCGTTTGTTTTCAGGAGAAGATGACGATGATGAAACGGCATTCAAGTACAAATTGAAGAATGCATCTGCTTCGAAAGGAAATGCAAAAAAATGA 834 0.5612 MALEALNSPTASSTPFRSYEEEKEVDLHFREPWAKGKRSKRPRFETEEEYLALCLIMLAQSGNNTTSHRQTQPSSSHSHSHSHKQGSSPVKLTHTCSICNKSFPSYQALGGHKASHRKSSSESASTAASTAAANDVVTASTTGGGRMHECSICHKTFATGQALGGHKRCHYDGGNNHSNANNSSGVTSSDCGGGASSSHALRGFDLNLPAPLTEFWPPVGFDFGKKKVNGGGEQEVESPLPVTAKRPRLFSGEDDDDETAFKYKLKNASASKGNAKK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr740g00003 277 MobiDBLite consensus disorder prediction 1 42 - -
Mupr740g00003 277 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Mupr740g00003 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 170 IPR013087 -
Mupr740g00003 277 Gene3D Classic Zinc Finger 91 170 - -
Mupr740g00003 277 SUPERFAMILY beta-beta-alpha zinc fingers 94 170 IPR036236 -
Mupr740g00003 277 MobiDBLite consensus disorder prediction 64 89 - -
Mupr740g00003 277 MobiDBLite consensus disorder prediction 17 42 - -
Mupr740g00003 277 Pfam C2H2-type zinc finger 94 118 - -
Mupr740g00003 277 Pfam C2H2-type zinc finger 148 172 - -
Mupr740g00003 277 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 37 210 IPR044653 GO:0003700
Mupr740g00003 277 MobiDBLite consensus disorder prediction 226 256 - -
Mupr740g00003 277 MobiDBLite consensus disorder prediction 1 16 - -
Mupr740g00003 277 SMART c2h2final6 148 170 IPR013087 -
Mupr740g00003 277 SMART c2h2final6 94 116 IPR013087 -
Mupr740g00003 277 MobiDBLite consensus disorder prediction 109 133 - -
Mupr740g00003 277 ProSitePatterns Zinc finger C2H2 type domain signature. 150 170 IPR013087 -
Mupr740g00003 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr740g00003 Mupr-Chr740 30347 31820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr740g00003 1 249 C2H2 Transcription Factor Family AT1G27730 45.000 1.50e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr740g00003 zf-C2H2_6 1.6e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr740g00003 - - gmx:100806788 357.836