Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr740g00002 ATGGCATCTGTGGTGGCCGGTTCGGGGCGAGAGTTGTCCAACCCTCCGTCTGATGGAATCTCGAACCTTCGATTCTCTAATCACAGCGATCATCTGCTGGTGTCGTCATGGGACAAGAGCGTGCGGTTGTATGATGCGAGCGCCAATGTGTTGAGAGGAGAATTCATGCACGCCGGCCCCGTCCTCGATTGCTGCTTCCACGACGACTCCTCCGGCTTCACTGCCTCCGCCGACAACACTGTTAGACGCCTTGTCTTCAGCTCTAATAAAGAGGATATTCTGGGAAGGCATGATGCACCTGTTCGTTGTGTTGAGTACTCCTATGCTGCAGGGCAAGTGATCACTGGTAGTTGGGACAAAACCCTTAAATGTTGGGACCCTAGAGGTGCAAGTGGCCAAGAGCGCACGCTCGTTGGCACGTATCCGCAGCCTGAGCGTGTTTACTCTCTCTCTCTCGTTGGACACCATCTACTTGTAGCCACAGCTGGAAGACATGTTAATATTTATGATTTGAGGAACATGTCTCAGCCTGAGCAACGAAGAGAATCTTCATTGAAATATCAAACCAGATGTGTGCGTTGTTACCCAAATGGAACAGGATATGCACTTAGTTCTGTGGAAGGGCGGGTTGCGATGGAATTCTTTGACCTCTCAGAGTCTAGCCAAGCAAAAAAATATGCTTTCAAGTGTCACAGAAAATCAGAGGCCGGAAGGGACATAGTCTATCCTGTGAATGCAATTGCATTCCACCCCATATATGGAACGTTTGCCACAGGTGGTTGTGACGGGTATGTTAACGTGTGGGACGGAAACAATAAGAAGAGGCTATACCAGTACTCAAAATATCCTACTAGCATTGCTGCACTTTCGTTTAGCAGGGATGGACGCCTCTTGGCTGTTGCATCAAGTTATACATTCGAAGAAGGGCCTAAAGCCTACGAACAAGATGCTATCTACGTTCGGAGTGTAAACGAGATTGAGGTGAAGCCGAAGCCCAAAGTCTATCCCAATACTCCAGCGTGA 1023 0.4897 MASVVAGSGRELSNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHAGPVLDCCFHDDSSGFTASADNTVRRLVFSSNKEDILGRHDAPVRCVEYSYAAGQVITGSWDKTLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGHHLLVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSESSQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGPKAYEQDAIYVRSVNEIEVKPKPKVYPNTPA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr740g00002 340 FunFam Mitotic checkpoint protein bub3, putative 5 333 - -
Mupr740g00002 340 PANTHER MRNA EXPORT FACTOR AND BUB3 10 326 - -
Mupr740g00002 340 MobiDBLite consensus disorder prediction 1 20 - -
Mupr740g00002 340 SMART WD40_4 221 269 IPR001680 GO:0005515
Mupr740g00002 340 SMART WD40_4 48 85 IPR001680 GO:0005515
Mupr740g00002 340 SMART WD40_4 87 126 IPR001680 GO:0005515
Mupr740g00002 340 SMART WD40_4 134 170 IPR001680 GO:0005515
Mupr740g00002 340 SMART WD40_4 8 45 IPR001680 GO:0005515
Mupr740g00002 340 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 94 126 - -
Mupr740g00002 340 Pfam WD domain, G-beta repeat 18 45 IPR001680 GO:0005515
Mupr740g00002 340 Pfam WD domain, G-beta repeat 228 269 IPR001680 GO:0005515
Mupr740g00002 340 Pfam WD domain, G-beta repeat 94 126 IPR001680 GO:0005515
Mupr740g00002 340 SUPERFAMILY WD40 repeat-like 16 303 IPR036322 GO:0005515
Mupr740g00002 340 ProSiteProfiles Trp-Asp (WD) repeats profile. 94 126 IPR001680 GO:0005515
Mupr740g00002 340 ProSiteProfiles Trp-Asp (WD) repeats profile. 244 278 IPR001680 GO:0005515
Mupr740g00002 340 Gene3D - 8 334 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr740g00002 Mupr-Chr740 11161 13558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr740g00002 75 314 U-box Gene Family AT2G33340 25.000 2.34e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr740g00002 K02180 - gmx:100808389 672.544