Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7405g00001 ATGTCGTCGTCGACAAACGTAGTGGTTCTGGACAACGGTGGCGGGCTGATGAAAGCGGGGTTGGGCGGCGAACGCGACCCATCGGCCATTGTCCCGAACTGTCTGTACAGGCCGCCTGCATCGAAGAAATGGGTCCATCTGAACTCCGGAGAGCAAGACCTAACCTCGGCAGCGGTGCGGCGGCCGATGGACCGAGGGTACCTGATAAACCCGGAGCTGCAGCGGGAAATCTGGTCGCACCTGTTCGCTTCCGTTCTTCGCATAAACCCGTCGCAGTCGTCGCTCCTACTGACGGAGCCCCTCTTCACTCTCCCCTCCATCCAGCGCTCTCTGGACGAGCTTGTCTTTGAAGACTTCAACTTCCGCTCCCTCTACGTGGCCCATCCCCCCTCCCTCGTCCACCTCTACGAGGCCAGTCGCCGGCCCAATGGGCTCCTTCCCAAGGCCCAGTGCAGCCTCGTGGTTGACTCCGGCTTCTCCTTCACCCACGCCTCCCCCGTCTTCCACAACTTCACCCTCAACTATGCCGTCAAGCGTATCGACTTGGGCGGCAAGGCCCTCACCAACTACCTCAAGGAACTCGTCTCCTTCCGCTCCGTCAATGTCATGGAAGAGACCTTCATCATCGACGACGTCAAGGAGAAGCTCTGCTTCGTCTCCCTCGACGTCAACCGCGACCTCAACATCGCCAGGTTAATACTGTGGCCTGAGAAGAAGATTTCACATAGTGGGAAAGAGAATCTCTTTAGGTGCACCTATGTGCTTCCGGATGGTATCACACACACAAAGGGGTTTGTTAAGTATCCAGATCAGGCACAGCGGTATCTTGCATTGAGGGAGGGTGGCCTTCCTTCTTTGCCACTGGTGGAGGCAGAGGGGAATATGAATTGCCCAGAATTTGCTGAGCAGCCAGAGGACAGGAAGAAAGTTGATTTGACAAAAAATGAGTTTGACTTGACAAACGAACGGTTTCTTGTGCCAGAGATGATCTTCCGTCCTGCTGATTTGGGAATGAACCAGGCTGGGCTAGCAGAATGCATAGTGCGAGCTGTTAATGCGTGCCATCCACATCTCCACCCTGTACTCTATGAAAGCATCATATTAACGGGTGGAAGCACCTTATTTCCTCAGTTTGCTGAGAGATTAGAGAAGGAGCTTCGGCCTCTAGTTCCTGATGACTATCATGTGAAGATAACTACTCAAGAAGATCCCATACTAGGTGTTTGGCGTGGAGGGTCACTGTTGGCATCAAGTCCAGATTTTGAAGCAATGTGTGTGACCAAGTCTGAGTATGAGGAGCTTGGTTCTGCTAGATGTCGCAAGAGATTCTTTCATTAA 1338 0.5336 MSSSTNVVVLDNGGGLMKAGLGGERDPSAIVPNCLYRPPASKKWVHLNSGEQDLTSAAVRRPMDRGYLINPELQREIWSHLFASVLRINPSQSSLLLTEPLFTLPSIQRSLDELVFEDFNFRSLYVAHPPSLVHLYEASRRPNGLLPKAQCSLVVDSGFSFTHASPVFHNFTLNYAVKRIDLGGKALTNYLKELVSFRSVNVMEETFIIDDVKEKLCFVSLDVNRDLNIARLILWPEKKISHSGKENLFRCTYVLPDGITHTKGFVKYPDQAQRYLALREGGLPSLPLVEAEGNMNCPEFAEQPEDRKKVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNACHPHLHPVLYESIILTGGSTLFPQFAERLEKELRPLVPDDYHVKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7405g00001 445 Gene3D Actin; Chain A, domain 4 301 340 - -
Mupr7405g00001 445 FunFam ARP5 actin-related protein 5 homolog 341 407 - -
Mupr7405g00001 445 FunFam Actin-related protein 6 127 187 - -
Mupr7405g00001 445 CDD NBD_sugar-kinase_HSP70_actin 8 194 - -
Mupr7405g00001 445 Gene3D - 8 126 - -
Mupr7405g00001 445 Gene3D Actin; Chain A, domain 2 35 62 - -
Mupr7405g00001 445 Gene3D - 341 407 - -
Mupr7405g00001 445 SMART actin_3 5 444 IPR004000 -
Mupr7405g00001 445 FunFam Putative actin-related protein 5 408 436 - -
Mupr7405g00001 445 Gene3D - 127 187 - -
Mupr7405g00001 445 Gene3D Actin; Chain A, domain 4 188 229 - -
Mupr7405g00001 445 Pfam Actin 4 444 IPR004000 -
Mupr7405g00001 445 PANTHER ACTIN 8 436 IPR004000 -
Mupr7405g00001 445 SUPERFAMILY Actin-like ATPase domain 3 133 IPR043129 -
Mupr7405g00001 445 SUPERFAMILY Actin-like ATPase domain 150 444 IPR043129 -
Mupr7405g00001 445 Gene3D - 408 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7405g00001 Mupr-Chr7405 1262 4129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7405g00001 8 444 Cytoskeleton Gene Families AT3G18780 28.635 7.53e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7405g00001 K11662 - gmx:100819827 778.859