Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7359g00002 ATGCTTTGGAATTGTTATATACTAGCTGTCTCTGGCACTGGCAGTAGAAGCAGAAAAGTTCCAGAAATTCTGGTAAGGAAGCAAAGCAACGCAGCGTTTCGTGCCGCGGTTATGGATGGAATGTACGGAGTGCCGTCGACGGCGGAGTACGCCGACAAGGCCCTGATGACGCCGGAGAATCTGATTTTCCCGGCCGACTACCACGGCTATCTCATGTCCACCGCCGCCGCGGACCGGATTCCCATGTTCGGATCCGACGAGCTCTTCTCCGCCGAGCCCTCCGCCGCCGTGGCCACTCCCGGCGGAATTCAGCGGCAGCAGCAGGAAGACGACGTGGCCACCACCGTCATGAAGGCCAAAATCGCCTCCCACCCTCACTACCCTCGCCTCCTCCAAGCTTACATCGATTGCCAGAAGGTGAGACTCACGAGTGGTTGCAACAATTGTAACCGTTTCTCGGAGAAAGAAAAAACGGTTGGAGCGCCTCCGGAAATCGCGCGTTTGTTGGAGGAAATCCGGCGAGAAAACGACCTGTGTAAGAGCGACGTTGTTTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAATTTATGGAAACCTACTGCGACATGCTGGTGAAGTATAAATCCGACTTAGCTCGCCCTTTTGATGAAGCAACCACTTTCCTCAGCAAGATCGAAATGCAGCTCAGCCATCTCTGCACTGGCGCTTCCGTCTCCACCCTTTCTGATGATGGGGGGGTGTCTTCGGACGAAGATTTTAGTACCGGAGATGGCGATGCTCAAGATGGGCAATTAAAGGGTGAAGATCGTGAGCTGAAGGATAGGCTTTTACGTAAGTTTGGGAGTCACATTGGTACTTTGAAACTGGAGTTTTCAAAGAAGAAAAAGAAGGGCAAGCTTCCGAAGGAAGCAAGACAAATATTGCTTCAATGGTGGAATGTTCACTACAAATGGCCTTACCCAACGGAAGCTGATAAGATTGAACTGGCTAAGACAACAGGGCTAGATCAGAAGCAAATTAACAATTGGTTTATTAATCAAAGAAAACGTCATTGGAAACCATCCGAGAATATGCAGTTTTCTATGATGGAAAATCTTAACGGACGGTTCATTGCCGATGAGTGA 1128 0.5044 MLWNCYILAVSGTGSRSRKVPEILVRKQSNAAFRAAVMDGMYGVPSTAEYADKALMTPENLIFPADYHGYLMSTAAADRIPMFGSDELFSAEPSAAVATPGGIQRQQQEDDVATTVMKAKIASHPHYPRLLQAYIDCQKVRLTSGCNNCNRFSEKEKTVGAPPEIARLLEEIRRENDLCKSDVVSTCFGADPELDEFMETYCDMLVKYKSDLARPFDEATTFLSKIEMQLSHLCTGASVSTLSDDGGVSSDEDFSTGDGDAQDGQLKGEDRELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQILLQWWNVHYKWPYPTEADKIELAKTTGLDQKQINNWFINQRKRHWKPSENMQFSMMENLNGRFIADE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7359g00002 375 SMART ELK_2 272 293 IPR005539 GO:0003677
Mupr7359g00002 375 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 110 362 - -
Mupr7359g00002 375 SMART HOX_1 294 359 IPR001356 GO:0003677
Mupr7359g00002 375 Pfam KNOX1 domain 117 177 IPR005540 GO:0003677|GO:0005634
Mupr7359g00002 375 SMART KNOX2_2 184 235 IPR005541 GO:0003677|GO:0005634
Mupr7359g00002 375 MobiDBLite consensus disorder prediction 244 269 - -
Mupr7359g00002 375 CDD homeodomain 304 356 IPR001356 GO:0003677
Mupr7359g00002 375 ProSiteProfiles 'Homeobox' domain profile. 292 355 IPR001356 GO:0003677
Mupr7359g00002 375 Gene3D - 291 365 - -
Mupr7359g00002 375 ProSiteProfiles ELK domain profile. 272 292 IPR005539 GO:0003677
Mupr7359g00002 375 Pfam KNOX2 domain 188 234 IPR005541 GO:0003677|GO:0005634
Mupr7359g00002 375 Pfam Homeobox KN domain 312 351 IPR008422 GO:0003677|GO:0006355
Mupr7359g00002 375 ProSitePatterns 'Homeobox' domain signature. 330 353 IPR017970 GO:0000981|GO:0006355
Mupr7359g00002 375 SMART KNOX1_2 115 178 IPR005540 GO:0003677|GO:0005634
Mupr7359g00002 375 SUPERFAMILY Homeodomain-like 293 364 IPR009057 -
Mupr7359g00002 375 Pfam ELK domain 272 293 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7359g00002 Mupr-Chr7359 2462 10935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7359g00002 38 375 Homeobox Transcription Factor Family AT1G23380 63.873 2.65e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mupr7359g00002 KNOX1 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7359g00002 - - gmx:100794719 521.546