Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr734g00001 AAACCTTCCCCTGTACGTGAATCACTTGTTCTTCATGTAGAAAAGCTCAGCAGAAATGTCAATGAAGGCCATTTGAAGGAAATTTTCAGTAACTTTGGTGAGGTTGTAAGTGTGGAGTTGGCAATGGATCGAACTGTCAATCTTCCAAAAGGATATGGATATGTGCAGTTCAAGACAAGAGGGGATGCTGAAAAAGCATTGTTATACATGGATGGTGCCCAAATAGATGGCAATGTTATCAAGGCAAGATTTACTCTACCTCCAAGGCAGAAAGTTTCACCACCCCCAAAGGCTTCTGCTGTTGCTCCTAAGAGAGACACCCCCAGGACTGATAATCCTAGTGCAGATGTTGACAAGGATGGGCCAAAGCCTTCTCCTCGAAGAAAACCTCCTCCCTCACCACGGAGGAGATCTCCTGTGCCTCGAAGAGCTGGATCTCCAAGACGACCAGATTCTCCTCGCCGTCGTGCAGATTCTCCCATTCGACGCCGATTAGACTCTCCTTATCGTCGTGGAGGAGACACACCTCCTAGGAGGCGGCCTGTGTCTCCTGGAAGAGGTCGATCTCCTTCTCCACCAAGACGCCTTAGATCCCCTCCAAGGGTCTCACCTAGAAGGTTGCGTGGAAGCCCTGGTCGGAGACGTTCACCTCCTCCTCCTCCGAGGCGCCGATCACCACCTAGACGAGCTCGTAGTCCTCCTAGAAGGTCTCCAATTGGTCGTAGACGTACTCGCTCTCCAATACGTAGATCTGCACGCTCACGCTCAAGGTCATTCTCACCTCGCAGAAGAAAAAGAGATTTCAGAGTAACCATCCTGCTGATTAGGAAGAACCCAAGAAATGTTTATTTATTTCACAGAATACTTTCAGTAGGTAGACCACCTGTTAGACGTGGGAGGTCCTCATCTTACTCGGATTCACCAAGCCCACGC 933 0.4952 KPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSVELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVIKARFTLPPRQKVSPPPKASAVAPKRDTPRTDNPSADVDKDGPKPSPRRKPPPSPRRRSPVPRRAGSPRRPDSPRRRADSPIRRRLDSPYRRGGDTPPRRRPVSPGRGRSPSPPRRLRSPPRVSPRRLRGSPGRRRSPPPPPRRRSPPRRARSPPRRSPIGRRRTRSPIRRSARSRSRSFSPRRRKRDFRVTILLIRKNPRNVYLFHRILSVGRPPVRRGRSSSYSDSPSPR 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr734g00001 311 Gene3D - 1 93 IPR012677 -
Mupr734g00001 311 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 165 311 - -
Mupr734g00001 311 SUPERFAMILY RNA-binding domain, RBD 4 95 IPR035979 GO:0003676
Mupr734g00001 311 MobiDBLite consensus disorder prediction 86 263 - -
Mupr734g00001 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 9 87 IPR000504 GO:0003723
Mupr734g00001 311 SMART rrm1_1 10 83 IPR000504 GO:0003723
Mupr734g00001 311 MobiDBLite consensus disorder prediction 147 177 - -
Mupr734g00001 311 FunFam Serine/arginine-rich splicing factor SR45 1 94 - -
Mupr734g00001 311 CDD RRM_RNPS1 11 83 IPR034201 -
Mupr734g00001 311 MobiDBLite consensus disorder prediction 199 263 - -
Mupr734g00001 311 MobiDBLite consensus disorder prediction 109 126 - -
Mupr734g00001 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 81 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr734g00001 Mupr-Chr734 11415 13731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr734g00001 11 84 Eukaryotic Initiation Factors Gene Family AT2G23350 33.784 1.15e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr734g00001 K14325 - gmx:100783566 246.899