Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7339g00002 ATGAAAGAGGGTACAACTGTACATATGTTGATCAGCAACGGAATAGAGGATTTATGCAATGATAACTTCGAAGGATCTAACGAAGAAAGACAGATTTTTTCAGAGGTCTTTTCTGGTAATGACATTTTTCAGTCTAGTCAGAATTGTCTTGTTCCTGGAGCTATCAGCTTTGAACATGAATCCACTAAAAACACATTTAAATCATTCTGCTCTAGTAATGAAAACTCAGTTGTATTGCATCCCTCGTCTTCAAAACTTACACACCCTGAGGAGGACTTTAATGTAATTCAGCATTCCAAAGAGGCTGCTCTGGGGTGTGTGCCAGAGAGTTTCATTTGTGAAGACCAGAATGACGAAGATGTGAATGTCAAACGTATGAAATTTTCTCTGCATGAACTTGCTTGTAGTAGATCTGATTCAGAAAAAAATTTGAGTTCATCACGACCTTCGAAAGTAGTAGTTTCTAACCTGTCTTGTGCACCTACAGACTGTGATAGTGAACCAATTGCATTTCGTTTAGTTGAATCATCTAAACATGGTGTGATATCTAGTTGTTATCTATTGAACCATAACATGTTAAATAAACAAGCTGCTAAGGATGATGTAGATGCTACAAATTTTAACTCAACAACAGCAGATGGGAATGTTGCAAAAGAGGTGTCTGTAAGTAAAGCTTCTCCTGTTTCCCAGGAGAGCTTTGCAAACAGGCTTGTAGTTACTAGTCCATCAACCACTGTGGTGAAGAAGTCTGGGTCTCCTTTAAATCCTGAGGAAATGCCAGAATCTTCTAACATGGATATCTCAAATTCATCCTCAAAGCTAGAGGAAGAGGACCCTCGTACTATACTGCAGTTTCATATTGTGCAATTGCTTAGGATGGCAGGATGGTCTATTGAGAAGCGTCATCGACCTAGTAGGCGTTACATGGAGTCAGTTTATAGGACACCAGAGGGAAAACCTATCCGGGAGTTTACAAAAGCTTGGAGATTATGTGGTCAGTTATTGTCTGTTGAAAAATGCAATTTAATGTACAGAGATTATAAGGAATGGACTGATATTAGTCAATTCTGGTCTGATTTATCCAGTGCACTGATAAATGTTGAAAAAACAAAGACCCAGTCAGAAGACCCTGTTGCTATATTGGCTTATCGATGGTGGCTTTTGGATCCTTTTGTAGTAGTTATATTTGTTGATAGAAAGATTGGTGCACTGAAAAAGGGAGAAGTAGTGAAAGCAACTTGGAGTTTAGTTTCTAGTAAGTATAAGGTGGCATGTGCTCCCATTAATTCAAGCTCTGGAAATTCGAAGCAGGTATCTGCTGGGTCTAATGTAGATGCTGTTTATCAAGCCAAGATTAGAAATTTCAAAAGTGTTGATAAACAGAGTTCAGAAAATTATCTGGAAGCTAATAAAATTAATGATGGAGATGTGCCAATGGACTTGTCAGAGGAAAATAATGCATACGGTGTGAGTCATGGCCTGGTTCATTCTCATGTCTCAGATTCAAGGGCTATGCAACAGTCTGAATGTAGTGAGGAAGAGGGTGGGAAAATCTCAGTAGATTCTGTATTTGGGAAAGATAACACATATTCTGCTTCTAATGTTATTCTTAAAAGGAAATTGCGTAGGAAGTGCAAAAGGGTATCTGAAATCAAAATGAGTATGTTCTACCATAGTGGCATGCTGGGCTCAACTGTTAATGACCAGGTGCAGTCACTAAATGGTGAAGCATGCGGGTTGGAAGAGGTCCAGGATTATCTAGTTGACAATGCAGGAAAGAAAAGAAACTGCAGAAGGTTATCATCTGTCAGTGCAATCCAGAAAAATATTAGGAAAACAAACTGCTCCATAACTGGAACAGATAAGTCTAACAGGTGCCAGATTAAAGATGATGATTTATTGGTGTCTGCAATATTCAGGAATAAGGTCTTCAGCCCAAAGGCAATCCGGGGTAAGGGTAATTCTAGTGCTAAATCCTGCAAATCAAGGGGCCAGAGAAAGCTTAAAAGCCAAAAGGGCCGTTGCAGGTTGCAACCAAGGAACCCCTCTAATGGAGGGAAGCACAATAAGGACTGTAATAGGATTTATTTGGGTGCAAGGACAATATTATCCTGGTTGATTGATAATGGGGTCATATCTTTAAATGATGTGATTCAATACCGAAATCCTAAGGATAATGTTGTCATTAAGGATGGTAGGATCACCAAAGATGGTATTATTTGTACATGTTGTGATAGGGTGCTTACATTATCAGAGTTCAAGCTTCATGCTGGGTTTACACTGAATCGCCCCTGCCTGAATATTTTCATGGAGTCTGGTGAGTCCTTTACACTGTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCTAGGAAAAGCCAGAATCAAGCTGTGCATGCCGATGATAATGATAAAAATGATGATTCGTGCGGGTTGTGTGGTGAAGGGGGTGAGCTGATATGTTGTGATAACTGTCCATCTACTTTTCACCTAGCTTGTCTGTCCACTCAGGAGATCCCAGATGGCAACTGGTACTGCACAAACTGCACTTGTAGGATATGTGGAAATTTGGTTATTGATAAAGACACTTCAGATGCGCATGATTCATTACAATGTTCACAGTGTGAACATAAATATCATGAGAAATGCCTGAAAGATAAAGATAAACAAGATGGAGCAGTTGCAGACCCTTGGTTTTGTGGTCAGAATTGTCAGGAGGTGTACTCTGGACTCCAATCGCAGGTGGGGTTAGTTAATCAAGTTGCTGATGGCATCTCTTCGACACTTCTTAGATGCATCCATGACGACCAAAAAGTTCATTCTGCACAGTGGTTTGCCCTAAAGGCATTTTGCAATACAAAATTAGCTGTTGCTCTTACTATCATGGAGGAGTGTTTTGTGTCAATGTTTGATCCAAGAACAGGCATCCACATGATACCTCAAGTTTTATACAACTGGGGGTCTGAGTTTGCACGTCTGAATTTTCAAGGGTTTTACACTGTGGTGTTGGAGAAACAGGATGTGTTAATATCTGTAGCATCTATCAGGGTGCATGGAAGTACAGTAGCAGAGATGCCTCTAATTGCAACTTGCAGTCGCTATCGTCGCCAGGGAATGTGTCGGCTCCTTGTGAATGCTATTGAACAGATGCTAATATCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCAGATTTGGTTGAGACATGGACTAAGGGCTTTGGATTCATACCTGTTGATGACATTGAAAAGCAAAGATTGCAAAAAATTAACTTGATGGTTTTTCCTGGGACAGTGTTACTTGTGAAACCCTTACACGGGAAGGAGAAAATTGAAGCTGAAACAGGACTGTGTGATCAATCAACTCATGCAACAGATGAATCAATCGAAGTAGGTATCTGTTCTGAAGGAATGGCCATTACTGAATCATTGTCACAAGATGCTGGAAACATAACTACCAACAAAGTTGAAGCCAAGTCAGAACATGAACCTGTGGATGGCAAAAATCAATCAGACTATAAGGTTGTCAGTGAAACCAGCACAGATGATATTACACAAGCTGTTGACACTGCATTAGAAGCCAAAGAATCAACAGACATAAGTAGGTCTTCTAATGAAGAGAAGATCACCCCAGTGTCAGGTGTTGCCTCAGAGAAAATGGCAAGTGATTTGAGAACAAGCAACAAAGTGGGAATGGCAAGTGATTCAGGACAGCAATCTCGTGAGAATGGTTGTGCTAACAAAGATGGTGCTGAACCAGGTATAGGAATTGTTGAGGACAAGAATATCAAAGTAGGTGAGGGTCAGGAAAATGCTTTGCAGGGTCATTTTTCAAATTTGTCCTGCAAAACATTTATAGGCAACAATTTTGACACGGATTCCAATATTGAATGCTCAGTGATGTATGATGAAACAGCTTTTTTTGGAACATTTGCAAAGTCTGCAAGCTGA 3954 0.4014 MKEGTTVHMLISNGIEDLCNDNFEGSNEERQIFSEVFSGNDIFQSSQNCLVPGAISFEHESTKNTFKSFCSSNENSVVLHPSSSKLTHPEEDFNVIQHSKEAALGCVPESFICEDQNDEDVNVKRMKFSLHELACSRSDSEKNLSSSRPSKVVVSNLSCAPTDCDSEPIAFRLVESSKHGVISSCYLLNHNMLNKQAAKDDVDATNFNSTTADGNVAKEVSVSKASPVSQESFANRLVVTSPSTTVVKKSGSPLNPEEMPESSNMDISNSSSKLEEEDPRTILQFHIVQLLRMAGWSIEKRHRPSRRYMESVYRTPEGKPIREFTKAWRLCGQLLSVEKCNLMYRDYKEWTDISQFWSDLSSALINVEKTKTQSEDPVAILAYRWWLLDPFVVVIFVDRKIGALKKGEVVKATWSLVSSKYKVACAPINSSSGNSKQVSAGSNVDAVYQAKIRNFKSVDKQSSENYLEANKINDGDVPMDLSEENNAYGVSHGLVHSHVSDSRAMQQSECSEEEGGKISVDSVFGKDNTYSASNVILKRKLRRKCKRVSEIKMSMFYHSGMLGSTVNDQVQSLNGEACGLEEVQDYLVDNAGKKRNCRRLSSVSAIQKNIRKTNCSITGTDKSNRCQIKDDDLLVSAIFRNKVFSPKAIRGKGNSSAKSCKSRGQRKLKSQKGRCRLQPRNPSNGGKHNKDCNRIYLGARTILSWLIDNGVISLNDVIQYRNPKDNVVIKDGRITKDGIICTCCDRVLTLSEFKLHAGFTLNRPCLNIFMESGESFTLCLLQAWSAEYKARKSQNQAVHADDNDKNDDSCGLCGEGGELICCDNCPSTFHLACLSTQEIPDGNWYCTNCTCRICGNLVIDKDTSDAHDSLQCSQCEHKYHEKCLKDKDKQDGAVADPWFCGQNCQEVYSGLQSQVGLVNQVADGISSTLLRCIHDDQKVHSAQWFALKAFCNTKLAVALTIMEECFVSMFDPRTGIHMIPQVLYNWGSEFARLNFQGFYTVVLEKQDVLISVASIRVHGSTVAEMPLIATCSRYRRQGMCRLLVNAIEQMLISVKVEKLVVSAIPDLVETWTKGFGFIPVDDIEKQRLQKINLMVFPGTVLLVKPLHGKEKIEAETGLCDQSTHATDESIEVGICSEGMAITESLSQDAGNITTNKVEAKSEHEPVDGKNQSDYKVVSETSTDDITQAVDTALEAKESTDISRSSNEEKITPVSGVASEKMASDLRTSNKVGMASDSGQQSRENGCANKDGAEPGIGIVEDKNIKVGEGQENALQGHFSNLSCKTFIGNNFDTDSNIECSVMYDETAFFGTFAKSAS 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7339g00002 1317 CDD PHD1_AIRE 810 849 - -
Mupr7339g00002 1317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 854 908 IPR013083 -
Mupr7339g00002 1317 Gene3D - 958 1094 - -
Mupr7339g00002 1317 MobiDBLite consensus disorder prediction 649 688 - -
Mupr7339g00002 1317 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 960 1107 IPR000182 GO:0016747
Mupr7339g00002 1317 Pfam Tify domain binding domain 732 782 IPR032308 -
Mupr7339g00002 1317 MobiDBLite consensus disorder prediction 1196 1254 - -
Mupr7339g00002 1317 MobiDBLite consensus disorder prediction 1221 1246 - -
Mupr7339g00002 1317 SUPERFAMILY FYVE/PHD zinc finger 794 851 IPR011011 -
Mupr7339g00002 1317 PANTHER PHD FINGER FAMILY PROTEIN 5 1207 - -
Mupr7339g00002 1317 Pfam PHD-finger 810 851 IPR019787 -
Mupr7339g00002 1317 MobiDBLite consensus disorder prediction 244 270 - -
Mupr7339g00002 1317 ProSiteProfiles Zinc finger PHD-type profile. 807 852 IPR019787 -
Mupr7339g00002 1317 SMART PHD_3 809 850 IPR001965 -
Mupr7339g00002 1317 SMART PHD_3 851 905 IPR001965 -
Mupr7339g00002 1317 MobiDBLite consensus disorder prediction 1158 1180 - -
Mupr7339g00002 1317 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 957 1083 IPR016181 -
Mupr7339g00002 1317 MobiDBLite consensus disorder prediction 244 273 - -
Mupr7339g00002 1317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 800 853 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7339g00002 Mupr-Chr7339 9913 19168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7339g00002 9 1119 PHD Transcription Factor Family AT3G14980 40.901 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr7339g00002 TDBD 5.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7339g00002 - - gmx:100777440 2243.77