Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7339g00001 ATGTTGGCAATGGAAGAGGTACTGTGTGAACTTAGCGATCATGAAAGGAGAAACGAGCAAGGTCTGCCACCGGGTTTCAGGTTTCACCCCACTGATGAAGAACTTATAACCTTTTACTTGGCTTCAAAAGTCTTCAACGGGACCTTCACCAATGTCAAGTTTGCCGAGGTTGACCTCAATCGATGTGAGCCTTGGGAACTTCCAGATGTGGCAAAGATGGGGGAGAGGGAGTGGTATCTGTTCAGTTTGAGGGACAGAAAATACCCAACTGGGCTAAGAACAAACAGGGCCACCGGAGCTGGGTACTGGAAGGCGACTGGGAAGGACAAGGAAGTGTACAGTGCATCGAGTGGAACCCTACTTGGAATGAAGAAGACCCTTGTTTTCTACAAAGGCAGGGCCCCTCGAGGTGAAAAGACCAAATGGGTCATGCACGAGTACCGTTTGGACGGTCACTTTTCTCACACTCACACCTCTAAGGAGGAGTGGGTGATATGCAGGATATTTCATAAATGTGGGGAAAAGAGAACAACACTGGTCCAACAAGTCCAAGGACATTCGGATGCATGTTCGTCCCCAACAAAAAGTTCCTTATTACCTCCATTACATGCAAGCTCAACTTCCTTTACATTGGAGCTAGAATGTCAATCCCAAAGCTCATCTCATTCTCAGAGAGACTTCCAAAGCCAAGTTCTGATTCAACACCACCACGACCAAAGTGACCTCTCTCACCCTACTCATCTTTTCCCATTGCATGCATCGCCAGAAATCACCAACGCCAGAAACCATCCATCATTTTCGGACCTTTTCCTCAGGCCCCATCAACAAAATTATTGCACCCTCAAGGCCAAGGAACAAACCATGTTTCTTCCATACCAATTACTAGATGACCCTAATAATAACCTGCGGTGGGTGAACAAGTTGAACCAAAATCCAAGCAATTTCCTGAACCCTCTTGAGGTGGATTCTGGCTTGATGGCAAATGCTCAAGTTAGGGACGTGTCCACTTCAACAGCCTTTAATAGGGTAGGCTTGCAGCAGGTGCTACTAGATGCTCACATCGGAATAGATTCTTGGCCTCTGGCCCAGCATGTTTAA 1098 0.4699 MLAMEEVLCELSDHERRNEQGLPPGFRFHPTDEELITFYLASKVFNGTFTNVKFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSASSGTLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGHFSHTHTSKEEWVICRIFHKCGEKRTTLVQQVQGHSDACSSPTKSSLLPPLHASSTSFTLELECQSQSSSHSQRDFQSQVLIQHHHDQSDLSHPTHLFPLHASPEITNARNHPSFSDLFLRPHQQNYCTLKAKEQTMFLPYQLLDDPNNNLRWVNKLNQNPSNFLNPLEVDSGLMANAQVRDVSTSTAFNRVGLQQVLLDAHIGIDSWPLAQHV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7339g00001 365 Gene3D NAC domain 31 175 IPR036093 GO:0003677|GO:0006355
Mupr7339g00001 365 ProSiteProfiles NAC domain profile. 22 171 IPR003441 GO:0003677|GO:0006355
Mupr7339g00001 365 FunFam NAC domain-containing protein 100-like 31 175 - -
Mupr7339g00001 365 SUPERFAMILY NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
Mupr7339g00001 365 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Mupr7339g00001 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7339g00001 Mupr-Chr7339 5645 7870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7339g00001 1 178 NAC Transcription Factor Family AT1G76420 75.281 2.34e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr7339g00001 NAM 8.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7339g00001 - - gmx:100780313 548.895