Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr732g00008 ATGATCCAAGAACTGTTGGGTGGTGCTAGTGCTAGTGCTAGCCTTATACCAGGAGAAAGGAAAATCTCCATTAATAACGCAGGAGGAGGAGGAGGACTTCTACTTACACCATCTTCTCCTTCTTCCTCATCTCCTTCTTGTACAACAAACATCACTTCTTCCACCACCGTCACTGCCACCACTTCGTCCAATTCTGAGAACCAAAACTTGAGGTGCCCTCGTTGTGATTCATCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGCGGCGCTCTCAGGAATGTTCCCATCGGAGGTGGTTGCCGGAAAAACAAGAACGCCGGGATGTCCAATTCGGTGGCGAAGCAAACCGCCACGAAGATGAAAGCGGTGGCATCGGAGCTTGGAAGGTCACCGGGACTCTTCGTGCAAGAGCTTCCACAAACCCCAATCCTATGGAGCTCACCGCAAAATACTCAACTGATGGCTTTTCTAAGGGCTAACCAAAACCCTAACCCTAACCCTAGTTCCATGTCAATTGCTGTCAAGGAAGAAGGGAACTTAATGGGATCTCACTCCCACATGGTGACTGAGCCATTGCTCGCAAATGGGTTGTTGAATCCTAGAAATCTAAGCTATGATGGTGTGGGAGAAGTTCCTTCACTGGGTCTATGCAGCTCTTTTTGGAGGAACAATCAAGATCAGAATCAGCAGCAAAATAACGGGTTTGTACTTGGAGAACACCAAAGTAGTGGAGTTCAAGAACTTTACCACAAGCTCAGGTCATCATCATCAGTCAATTATAGTTGCAGTGATAACTCACCAGTTTTTCTAGGCAACATGGCTTCTTCCTCTTCTTTGTCCAACATTTTGGAGTCATCTTCAGTTTCTGGAAGTGAATTCGGCTTAGCTCTCTCAAATTCAAGGATTACCAGAGTTTTTGGAATGAATGGAAAACGTAAAGTGAAGATGGTGGGTGGCATATGCAAGTGCAAGATTTTGTTTTGTTACGAGAAATCGATGAATCTAATGCAAAAGCAGCCTTGGGAAAAAGTTTCCTCAAACAGCATTAGATTCTTGATGTTGGTTGTGAGCAATCCACCAGCAATTGGTTCTTGGCACAGACTTCACTAA 1167 0.455 MIQELLGGASASASLIPGERKISINNAGGGGGLLLTPSSPSSSSPSCTTNITSSTTVTATTSSNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNAGMSNSVAKQTATKMKAVASELGRSPGLFVQELPQTPILWSSPQNTQLMAFLRANQNPNPNPSSMSIAVKEEGNLMGSHSHMVTEPLLANGLLNPRNLSYDGVGEVPSLGLCSSFWRNNQDQNQQQNNGFVLGEHQSSGVQELYHKLRSSSSVNYSCSDNSPVFLGNMASSSSLSNILESSSVSGSEFGLALSNSRITRVFGMNGKRKVKMVGGICKCKILFCYEKSMNLMQKQPWEKVSSNSIRFLMLVVSNPPAIGSWHRLH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr732g00008 388 MobiDBLite consensus disorder prediction 33 70 - -
Mupr732g00008 388 MobiDBLite consensus disorder prediction 35 70 - -
Mupr732g00008 388 ProSiteProfiles Zinc finger Dof-type profile. 70 124 IPR003851 GO:0003677|GO:0006355
Mupr732g00008 388 ProSitePatterns Zinc finger Dof-type signature. 72 108 IPR003851 GO:0003677|GO:0006355
Mupr732g00008 388 Pfam Dof domain, zinc finger 68 124 IPR003851 GO:0003677|GO:0006355
Mupr732g00008 388 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 60 266 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr732g00008 Mupr-Chr732 32825 34652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr732g00008 37 130 C2C2-Dof Transcription Factor Family AT5G65590 60.638 2.40e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr732g00008 zf-Dof 4e-32 No_clan