Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7317g00001 ATGCGTCAATCCGGACCCGAGAACAGAAATGGACCGGGTATTTGGGCCGGCCCGGCCTGGGTGGATATTCCCACTTGTAATAAAAGATACATGAACTCTGAATCATCTGCGGTGTTCCTTTGGTTCACTTCCGTTTCCCTCTCTCTCTACACCCACACCTCCCAAAAACCCAAAACCCTAACTCTCTCTCGGTCGCTCTTTCTCTCGCTCGCTCCAGCCATGAATTGCTCCATCTCCGGCGAAGTTCCGGAAGAGCCCGTCGTTTCCAGGAACTCCGGTCTCCTCTTCGAGAAGCGTTTGATTGAGCGACACATTTCGGATTATGGGAAATGTCCAATTACTGGAGAACCACTTACTTTGGATGACATTGTACCAATCAAGACAGGCAAGATAGTGAAGCCCAGACCTGTTCAGGCAGCTAGCATCCCCGGCATGCTTGGAATGTTCCAAAATGAATGGGATGGGTTGATGCTATCTAATTTTGCATTGGAGCAACAATTGCACACAGCAAGGCAAGAGCTAAGTCATGCTCTATATCAACATGATGCTGCTTGCCGAGTGATTGCAAGACTTAAAAAGGAACGAGATGAAGCCAGGTCTTTACTTGCACAAGCAGAAAGGCAGTTCCCTGTTTCTGCACCAAATGCCATAACAGCAAATGCCCCTGTCCTGAGCAATGGGAAAAGAGCTGCTGAGGATGAGGATCTGGCACCTGGTGCTAAGAAAATTCATCCTGGAATATCTTCTAGCATAATATCTGAGCTAACTGATTGCAATGCTGCTCTTTCCCAGCAGAGGAAGAAGCGACAGATTCCTGCAACTCTAGCTCCTGTTGAAGCTCTAGAGGCATATACCCAGATATCTAGTCACCCCTTTCACAAAACAAACAAACAAGGGATTACATCTCTTGATATCCTTTATTCTAAGGACTTAATTGCAACCGGAGGTATTGATACAAATGCTGTTATTTTTGACCGACCATCAGGACAGATACTAGCTACACTCAGTGGTCACTCTAAAAAGGTGACCAGTGTAAAGTTTGTAGCTCAGGGTGAATCATTCTTAACTGGTTCAGCAGATAAGACAGTTCGTCTATGGCAAGGGTCAGATGATGGTAACTATAACTGCAGGCACATCTTAAAGGATCATACAGCTGAGGTGCAAGCTGTCACCGTCCATGCAACAAATAATTACTTTGTGACTGCTTCACTTGATGGCTCTTGGTGCTTTTATGAACTTTCTTCAGGGACATGTCTGACTCAGGTTTTTGATTCTTCGGGTTCTTCTGAAGGCTACACATCTGCAGCTTTTCATCCTGATGGTCTCATTCTTGGAACCGGTACCACAGAATCACTTGTTAAGATCTGGGATGTAAAAAGTCAGGCAAATGTTGCTAGGTTTGATGGGCATGTTGGGGCAGTAACTGCCATATCTTTCTCTGAGAATGGATACTTCCTTGCGACTGCTGCTCATGATGGTGTTAAGCTTTGGGATCTACGTAAATTGAAAAACTTCAGGAATTTTGCTCCATATGATTCAGAAACACCAACAAACTCTGTGGAGTTCGACCACAGTGGATCATACCTTGCAGTTGCTGGCTCTGATATAAGGATTTACCAAGTTGCAAATGTGAAATCTGAATGGAACTGTATCAAAACCTTCCCTGATTTATCCGGAACAGGGAAGGCCACGTGTGTAAAATTTGGTCCAGATTCTAAATACATAACAGTGGGATCAATGGACCGGAATCTTCGGATATTTGGCTTGCCCGGTGAAGATGCTCCTACTGAGTCATAA 1797 0.4496 MRQSGPENRNGPGIWAGPAWVDIPTCNKRYMNSESSAVFLWFTSVSLSLYTHTSQKPKTLTLSRSLFLSLAPAMNCSISGEVPEEPVVSRNSGLLFEKRLIERHISDYGKCPITGEPLTLDDIVPIKTGKIVKPRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQFPVSAPNAITANAPVLSNGKRAAEDEDLAPGAKKIHPGISSSIISELTDCNAALSQQRKKRQIPATLAPVEALEAYTQISSHPFHKTNKQGITSLDILYSKDLIATGGIDTNAVIFDRPSGQILATLSGHSKKVTSVKFVAQGESFLTGSADKTVRLWQGSDDGNYNCRHILKDHTAEVQAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVFDSSGSSEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTNSVEFDHSGSYLAVAGSDIRIYQVANVKSEWNCIKTFPDLSGTGKATCVKFGPDSKYITVGSMDRNLRIFGLPGEDAPTES 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 367 IPR001680 GO:0005515
Mupr7317g00001 598 SUPERFAMILY WD40 repeat-like 294 587 IPR036322 GO:0005515
Mupr7317g00001 598 Gene3D - 274 589 IPR015943 GO:0005515
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 425 460 - -
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats profile. 380 421 IPR001680 GO:0005515
Mupr7317g00001 598 Pfam WD domain, G-beta repeat 329 366 IPR001680 GO:0005515
Mupr7317g00001 598 Pfam WD domain, G-beta repeat 463 498 IPR001680 GO:0005515
Mupr7317g00001 598 Pfam WD domain, G-beta repeat 548 587 IPR001680 GO:0005515
Mupr7317g00001 598 FunFam Pre-mRNA-processing factor 19, putative 74 131 - -
Mupr7317g00001 598 Pfam Prp19/Pso4-like 139 204 IPR013915 -
Mupr7317g00001 598 CDD WD40 299 587 - -
Mupr7317g00001 598 SMART WD40_4 373 412 IPR001680 GO:0005515
Mupr7317g00001 598 SMART WD40_4 328 367 IPR001680 GO:0005515
Mupr7317g00001 598 SMART WD40_4 547 588 IPR001680 GO:0005515
Mupr7317g00001 598 SMART WD40_4 285 325 IPR001680 GO:0005515
Mupr7317g00001 598 SMART WD40_4 416 457 IPR001680 GO:0005515
Mupr7317g00001 598 SMART WD40_4 501 540 IPR001680 GO:0005515
Mupr7317g00001 598 SMART WD40_4 460 498 IPR001680 GO:0005515
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats profile. 425 466 IPR001680 GO:0005515
Mupr7317g00001 598 ProSiteProfiles U-box domain profile. 69 143 IPR003613 GO:0004842|GO:0016567
Mupr7317g00001 598 Coils Coil 188 208 - -
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 467 500 - -
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats profile. 467 507 IPR001680 GO:0005515
Mupr7317g00001 598 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 133 IPR013083 -
Mupr7317g00001 598 PANTHER PRE-MRNA-PROCESSING FACTOR 19 73 589 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
Mupr7317g00001 598 SUPERFAMILY RING/U-box 74 126 - -
Mupr7317g00001 598 CDD RING-Ubox_PRP19 74 127 - -
Mupr7317g00001 598 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 335 367 - -
Mupr7317g00001 598 SMART Ubox_2 73 139 IPR003613 GO:0004842|GO:0016567
Mupr7317g00001 598 FunFam pre-mRNA-processing factor 19 272 589 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7317g00001 74 598 U-box Gene Family AT1G04510 74.857 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7317g00001 K10599 - gmx:100527039 1031.94