Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7306g00002 ATGTCCACTTTGCAGATGTCCCATGTTGATTTGGAGCAAGGGAACCAGCATCGGCGTTCGGTTGTTGGAAGTGATGTGAGTGGTGAAGGGAGTATATGCTTCTCTGATGCTGATGATGGTTCGTGCTATTCCCGTTTCTACTCAACAAACGGTGGTTCGTACGATGATTACAGCTTCGCTTGTGTTTCTGATCCCGAGGTAGGGGGTGTTGCTCATTCTGGGAGAGGTTCTTCTGTTTCTGATTGCTCTGTGGAGGTGGAAACTAGAAGTGGGGTTCCTGAGATCAAGGTGCATTTGGCTAAAGTGGAGAAGGATTGCAGGATTTGTCATATGGGTTTGGAGAGTGATAGTCACGAGTCTGGTGCCCCCATCGAATTGGGTTGCTCCTGTAAGGATGATTTGGCTGCTGCTCACAAGCACTGTGCTGAGGCCTGGTTCAAGATTAAGGGAAACAGGACCTGTGAAATTTGTCATTCCATTGCTCGGAATGTTTACAGCGCAAATGAGGAGTTGGGGGAGCATTTGAGTGACGGCAACAATGCTACTACTACAGCAGCCACACTCTCCACACCTGCTCCTTCAGCAGAACCTCGAAGATTTTGGCACGGCCATCGCTTCCTGAATTTCCTACTTGCTTGTATGGTTTTTGCATTTGTCATATCATGGCTTTTTCACTTCAATGTGCCATCATCCTAG 696 0.4784 MSTLQMSHVDLEQGNQHRRSVVGSDVSGEGSICFSDADDGSCYSRFYSTNGGSYDDYSFACVSDPEVGGVAHSGRGSSVSDCSVEVETRSGVPEIKVHLAKVEKDCRICHMGLESDSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIKGNRTCEICHSIARNVYSANEELGEHLSDGNNATTTAATLSTPAPSAEPRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7306g00002 231 MobiDBLite consensus disorder prediction 1 26 - -
Mupr7306g00002 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 167 IPR013083 -
Mupr7306g00002 231 PANTHER ZINC FINGER, RING-CH-TYPE 19 230 - -
Mupr7306g00002 231 CDD RING_CH-C4HC3_MARCH 106 158 - -
Mupr7306g00002 231 MobiDBLite consensus disorder prediction 1 22 - -
Mupr7306g00002 231 Pfam RING-variant domain 106 157 IPR011016 GO:0008270
Mupr7306g00002 231 SUPERFAMILY RING/U-box 103 160 - -
Mupr7306g00002 231 SMART ringv_2 105 158 IPR011016 GO:0008270
Mupr7306g00002 231 ProSiteProfiles Zinc finger RING-CH-type profile. 98 164 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7306g00002 Mupr-Chr7306 28180 30979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7306g00002 70 231 C3H Transcription Factor Family AT5G05830 61.350 2.07e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7306g00002 - - gmx:100808666 425.631