Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7300g00003 ATGTTCCCTGCAGTTATGTCCAATTCCAATTCCTTGTCCGAAGAGGCCACTGTCTCCTGTGGTACAAGAATCTCTGGAGTAAATCACATAGTCACAACCATTTCTCCACAACAGCCTCAAAAGATCAAGAAAAAGAGAAGCCTCCCTGGAAACCCAGACCCGGATGCTGAAGTGATTGCTTTATCACCGAAGACTCTTCTAGCCACCAATAGATTTGTGTGTGAGATCTGCAACAAGGGTTTCCAGAGAGACCAGAACCTTCAGCTTCATAGGAGAGGGCATAACCTGCCATGGAAGCTGAAGCAAAGGAACAACAAAGAGATGAGAAAGAAAGCCTACGTTTGCCCAGAGCCTTCATGCGTTCACCACAACCCCTCAAGGGCTCTTGGGGACCTCACGGGAATTAAGAAACACTACTGCAGAAAACATGGAGAGAAGAAGTGGAAATGTGACAAGTGCTCAAAGATCTATGCGGTTCAGTCAGATTGGAAAGCTCACTCTAAAACCTGTGGTACTAGAGAATATAGATGTGATTGTGGAACCCTCTTTTCCAGGAAGGACAGCTTCATAACTCACAGAGCATTCTGTGATGCATTGGCTGAAGAAAGTGCAAGAGTGTCAGCAAACCAATTAGCCGCCACATCCACCACAAACCCATTAGTCCAATCCCTCTTCCTTTTCCCAAACCAACAACAACACAACAATTTCATCAATCCCTGGGACCCTAACCCTAACCCTAGCAACCTTGCTACCCTCCACAACAACATCAAACCTGAATCTCAAAACTTTCACATCCCCAACAATGTTAACAACCTCTCTTCTTCCCCATTCCTTCACCACCACCCCAAGACCATGATAACCTCACCCTTCCGTGACCTCCACGCGCACGCGCAACCCCACTCCAACGCTGCCACGTCAGCACACCTCTCCGCCACCGCACTGCTCCAGAAGGCCGCAACCGTCGGAGCCGCTCCCTTGACGGGCCCCACTCACGTGACTCAGCTCAGCATGGCCGAGTTGGGAACCGTGACTCAGCTCGACTCGGTGCCACCCGAACGCTACATGAACATGAGAGGCCTCAAGAACAGTGACGGTCTCACGAGGGACTTTCTGGGCCTCGCCAACGCCGGCGCGGTTGACGTTAGCATCGATGTCAAGGATATGCTAACGTTCACGGGAGGGAGCGCAGAGTACAACCATCACCACCAACCCTATGAGCACCATCATAATAACTCGCTTTTCAAGCCCCAACAAGGTTTTGGATTCCTTGGGACAACCACTGGCCCCGAATCCTGGGGAAATTGTGAGTAA 1311 0.5034 MFPAVMSNSNSLSEEATVSCGTRISGVNHIVTTISPQQPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEMRKKAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARVSANQLAATSTTNPLVQSLFLFPNQQQHNNFINPWDPNPNPSNLATLHNNIKPESQNFHIPNNVNNLSSSPFLHHHPKTMITSPFRDLHAHAQPHSNAATSAHLSATALLQKAATVGAAPLTGPTHVTQLSMAELGTVTQLDSVPPERYMNMRGLKNSDGLTRDFLGLANAGAVDVSIDVKDMLTFTGGSAEYNHHHQPYEHHHNNSLFKPQQGFGFLGTTTGPESWGNCE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7300g00003 436 Gene3D Classic Zinc Finger 51 120 - -
Mupr7300g00003 436 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 34 396 IPR031140 -
Mupr7300g00003 436 SUPERFAMILY beta-beta-alpha zinc fingers 71 168 IPR036236 -
Mupr7300g00003 436 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Mupr7300g00003 436 Pfam Zinc finger, C2H2 type 72 94 IPR013087 -
Mupr7300g00003 436 Gene3D Classic Zinc Finger 141 208 - -
Mupr7300g00003 436 FunFam protein indeterminate-domain 5, chloroplastic-like 126 205 - -
Mupr7300g00003 436 SMART c2h2final6 72 94 IPR013087 -
Mupr7300g00003 436 SMART c2h2final6 113 143 IPR013087 -
Mupr7300g00003 436 SMART c2h2final6 148 168 IPR013087 -
Mupr7300g00003 436 MobiDBLite consensus disorder prediction 36 55 - -
Mupr7300g00003 436 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 94 IPR013087 -
Mupr7300g00003 436 FunFam protein indeterminate-domain 12-like 51 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7300g00003 Mupr-Chr7300 28252 31791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7300g00003 17 424 IDZ Gene Family AT4G02670 49.180 2.55e-120 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr7300g00003 zf-C2H2 0.0043 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7300g00003 K25870 - gmx:100780056 759.985