Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7300g00002 ATGAGTTATACATATCCAGTGAAAGAAGAATACTCGGAACCATCATCATCATATCAATTAGATAGTGAATATCCACCGAAGCCAATTGAGGGACTTCATGACACAGGACCCCCTCCATTCCTCACCAAAACTTTTGATGTTGTGAATGACTCAGCTACCAACCATGTAGTTTCTTGGAGCAGAGATGGCACAAGCTTTGTGGTTTGGGATCCACATACCTTCTCAACAAGTCTACTTCCCAGATACTTCAAGCACGGCAATTTCTCAAGCTTTGTCAGGCAGCTAAACACTTATGGTTTTAGAAAAATTAATCCAGATAGATGGGAGTTTGCAAATGAAGGATTCTTGAGAGGGCACAAGCACCTGTTGAGGAGCATAAGGAGAAGGAAGGTGCCTTCCCAATTAACACAAGGTCACCACTGCGTTGAAGTAGGACGTTTTGAATTAGACAAAGAGATTGATCGTTTGAGGCACGACAAGCTGGTGTTGATGATGGAGCTTGTGAATCTAAGACAGCAGCAACAGAATACCAGATTGTGCATTCAGGAGATGGAGCGAAGGTTACAAGGGACAGAAATCAAGCAGCAGCAGATGATGTCATTCTTAGCTAAAGCTATAAGAAATCCTGCCTTTATACACCAACTCCAACAGAAAGAGAAGAGAAAGGAGCTTGAAGAAGCCTTCACCAAAAAGAGAAGGCAAATTGAGCAAGGAGCTAGAGGTATTGGAGAATCAAGCAGTGTTAAAGTTGAGGCCTTAGAATTTGGGGATAATGAATTTGGAGTGTCAGAGTTGGAAATGTTAGCTAGGGAAATGCAGGGTTTTGGAAAGGGGAGGATAGAGAGGGAGGTAGGAATGGAGGCACTGGAATCACAAAGGCTGAATAGAGTACTTGATGAAGAGTTTTGGGAAGAACTATTGTTTAGTGAGAAATTTGAGGGTCGATTAGACATTCCAACTGCTGAAGATAAAGATGAAAATGTTGTCCATGTGTTGGCCAATCAACTTGGTTGCTTGGATTCAAACTTCAGGTCATGTCAAAGTAAATTTGCTCAACAAGACGTCACATGGAGGAGTCATCCTAATTGGCACAAGACAGTTGCTACTGGTGATTGGACAAGAGTCTTTGGTAGTGATAGCGATTACTCAGAAGATGTAGCATGGACAAGAAGTGGCCGATCTCCAACAATAGTAACTGAAGATCAAGAGCCAGTTGTTTGGTTAAGGTTGTCG 1233 0.4234 MSYTYPVKEEYSEPSSSYQLDSEYPPKPIEGLHDTGPPPFLTKTFDVVNDSATNHVVSWSRDGTSFVVWDPHTFSTSLLPRYFKHGNFSSFVRQLNTYGFRKINPDRWEFANEGFLRGHKHLLRSIRRRKVPSQLTQGHHCVEVGRFELDKEIDRLRHDKLVLMMELVNLRQQQQNTRLCIQEMERRLQGTEIKQQQMMSFLAKAIRNPAFIHQLQQKEKRKELEEAFTKKRRQIEQGARGIGESSSVKVEALEFGDNEFGVSELEMLAREMQGFGKGRIEREVGMEALESQRLNRVLDEEFWEELLFSEKFEGRLDIPTAEDKDENVVHVLANQLGCLDSNFRSCQSKFAQQDVTWRSHPNWHKTVATGDWTRVFGSDSDYSEDVAWTRSGRSPTIVTEDQEPVVWLRLS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7300g00002 411 ProSitePatterns HSF-type DNA-binding domain signature. 79 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr7300g00002 411 Gene3D - 32 130 IPR036388 -
Mupr7300g00002 411 PRINTS Heat shock factor (HSF) domain signature 78 90 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr7300g00002 411 PRINTS Heat shock factor (HSF) domain signature 40 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr7300g00002 411 PRINTS Heat shock factor (HSF) domain signature 91 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr7300g00002 411 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 243 IPR027725 -
Mupr7300g00002 411 SUPERFAMILY "Winged helix" DNA-binding domain 36 129 IPR036390 -
Mupr7300g00002 411 Coils Coil 167 187 - -
Mupr7300g00002 411 SMART hsfneu3 36 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr7300g00002 411 FunFam Heat shock transcription factor 1 33 130 - -
Mupr7300g00002 411 Pfam HSF-type DNA-binding 40 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr7300g00002 411 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7300g00002 Mupr-Chr7300 12360 14248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7300g00002 26 341 HSF AT3G22830 51.374 1.89e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr7300g00002 HSF_DNA-bind 2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7300g00002 K09419 - gmx:100811945 575.474